Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 Y_RNA.11-201ENST00000362375 109 ntBASIC4.19□□□□□ -1.74
RHOP08100 SNORA73.2-201ENST00000364946 201 ntBASIC4.19□□□□□ -1.74
RHOP08100 SNORD82-201ENST00000365530 70 ntBASIC4.19□□□□□ -1.74
RHOP08100 RPS4XP8-201ENST00000402039 771 ntBASIC4.19□□□□□ -1.74
RHOP08100 RNA5SP146-201ENST00000410743 123 ntBASIC4.19□□□□□ -1.74
RHOP08100 SNORA57.3-201ENST00000411095 141 ntBASIC4.19□□□□□ -1.74
RHOP08100 JKAMPP1-201ENST00000413804 919 ntBASIC4.19□□□□□ -1.74
RHOP08100 RPL21P111-201ENST00000418453 477 ntBASIC4.19□□□□□ -1.74
RHOP08100 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.19□□□□□ -1.74
RHOP08100 AC019097.1-201ENST00000424783 735 ntBASIC4.19□□□□□ -1.74
RHOP08100 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 USP9YP15-201ENST00000442391 422 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 RNU6-420P-201ENST00000458780 107 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.19□□□□□ -1.74
RHOP08100 RNA5SP179-201ENST00000517284 121 ntBASIC4.19□□□□□ -1.74
RHOP08100 PTP4A1P6-201ENST00000531034 478 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.19□□□□□ -1.74
RHOP08100 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 CYCSP30-201ENST00000546447 172 ntBASIC4.19□□□□□ -1.74
RHOP08100 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.19□□□□□ -1.74
RHOP08100 AL359212.1-201ENST00000556608 614 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.19□□□□□ -1.74
RHOP08100 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.19□□□□□ -1.74
RHOP08100 NRBF2P5-201ENST00000603087 788 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC091167.4-201ENST00000605079 184 ntBASIC4.19□□□□□ -1.74
RHOP08100 AL391813.2-201ENST00000609113 322 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC009033.1-201ENST00000624279 431 ntBASIC4.19□□□□□ -1.74
RHOP08100 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.19□□□□□ -1.74
RHOP08100 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RHOP08100 AL161912.2-201ENST00000565707 3007 ntBASIC4.19□□□□□ -1.74
RHOP08100 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RHOP08100 AL354685.2-201ENST00000448218 1447 ntBASIC4.19□□□□□ -1.74
RHOP08100 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RHOP08100 AC092435.4-201ENST00000623012 4159 ntBASIC4.19□□□□□ -1.74
RHOP08100 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 AC067945.1-201ENST00000342609 618 ntBASIC4.18□□□□□ -1.74
RHOP08100 MIR208A-201ENST00000362287 71 ntBASIC4.18□□□□□ -1.74
RHOP08100 RNU6-1279P-201ENST00000383917 103 ntBASIC4.18□□□□□ -1.74
RHOP08100 U3.20-201ENST00000390909 217 ntBASIC4.18□□□□□ -1.74
RHOP08100 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 RPS23P10-201ENST00000416185 486 ntBASIC4.18□□□□□ -1.74
RHOP08100 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 MTATP6P18-201ENST00000417994 673 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 RPL7P52-201ENST00000449200 742 ntBASIC4.18□□□□□ -1.74
RHOP08100 RAD23BP3-201ENST00000454157 1152 ntBASIC4.18□□□□□ -1.74
RHOP08100 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 AC083798.1-201ENST00000472671 131 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC021382.1-201ENST00000483523 359 ntBASIC4.18□□□□□ -1.74
RHOP08100 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 RNU6-507P-201ENST00000516045 100 ntBASIC4.18□□□□□ -1.74
RHOP08100 RNU6-875P-201ENST00000516488 106 ntBASIC4.18□□□□□ -1.74
RHOP08100 AF235103.2-201ENST00000525753 346 ntBASIC4.18□□□□□ -1.74
RHOP08100 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.18□□□□□ -1.74
RHOP08100 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 SETP2-201ENST00000553886 926 ntBASIC4.18□□□□□ -1.74
RHOP08100 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.18□□□□□ -1.74
RHOP08100 RPL21P7-201ENST00000557463 483 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 UBE2V2P2-201ENST00000587677 504 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 C8orf59P2-201ENST00000603441 271 ntBASIC4.18□□□□□ -1.74
RHOP08100 SNORA51-201ENST00000606420 132 ntBASIC4.18□□□□□ -1.74
RHOP08100 Y_RNA.804-201ENST00000615262 101 ntBASIC4.18□□□□□ -1.74
RHOP08100 AL158196.1-201ENST00000616786 434 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.18□□□□□ -1.74
RHOP08100 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC244100.1-202ENST00000621554 382 ntBASIC4.18□□□□□ -1.74
RHOP08100 MIR7702-201ENST00000621931 59 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC079597.1-201ENST00000624306 508 ntBASIC4.18□□□□□ -1.74
RHOP08100 AC009161.2-201ENST00000624626 138 ntBASIC4.18□□□□□ -1.74
RHOP08100 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms