Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PDGFBP01127 SLC2A13P1-201ENST00000531560 322 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 PDCL2P2-201ENST00000533651 189 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.29□□□□□ -1.88
PDGFBP01127 HMGB1P6-201ENST00000569046 646 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFBP01127 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
PDGFBP01127 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFBP01127 AC106900.2-201ENST00000604994 317 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AC013244.3-201ENST00000605614 388 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AC107952.2-201ENST00000606048 486 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFBP01127 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFBP01127 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFBP01127 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFBP01127 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFBP01127 CR383658.2-201ENST00000547576 1525 ntBASIC3.29□□□□□ -1.88
PDGFBP01127 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFBP01127 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFBP01127 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFBP01127 RNU6-1122P-201ENST00000384449 107 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDGFBP01127 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AL031679.1-201ENST00000400616 525 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AL356131.1-201ENST00000405826 414 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AL450338.1-201ENST00000407987 512 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC068533.2-201ENST00000411872 306 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC006960.1-201ENST00000419980 153 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 TMEM167AP1-201ENST00000423409 219 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFBP01127 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.28□□□□□ -1.88
PDGFBP01127 AC084290.1-201ENST00000434995 374 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.28□□□□□ -1.88
PDGFBP01127 AC108734.1-201ENST00000439549 399 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 MTND3P1-201ENST00000441336 220 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.28□□□□□ -1.88
PDGFBP01127 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFBP01127 RPL21P134-201ENST00000453468 483 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 TRBV12-1-201ENST00000479785 344 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFBP01127 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.28□□□□□ -1.88
PDGFBP01127 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFBP01127 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 DUXAP6-201ENST00000553858 601 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC009097.3-201ENST00000563557 1018 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AL512347.1-201ENST00000566420 503 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC055876.1-202ENST00000567053 138 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFBP01127 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFBP01127 AC087241.4-201ENST00000612441 480 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC025588.4-201ENST00000615802 908 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC140725.3-201ENST00000616193 880 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AP000484.1-201ENST00000620067 1252 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.28□□□□□ -1.88
PDGFBP01127 AC010149.2-201ENST00000637608 315 ntBASIC3.28□□□□□ -1.88
PDGFBP01127 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDGFBP01127 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PDGFBP01127 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFBP01127 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PDGFBP01127 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PDGFBP01127 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDGFBP01127 OR56A5-201ENST00000340110 738 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PDGFBP01127 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PDGFBP01127 MIR1290-201ENST00000408735 78 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 U3.42-201ENST00000408746 214 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 RNU6-757P-201ENST00000410334 100 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC127526.1-201ENST00000417526 366 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AL139421.1-201ENST00000423010 169 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 RPL21P40-201ENST00000428586 483 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AL139132.1-201ENST00000431587 344 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 HSPE1P28-201ENST00000443139 211 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AL590664.1-201ENST00000448065 339 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.27□□□□□ -1.89
PDGFBP01127 RPL30P14-201ENST00000482744 348 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 CBX3P3-201ENST00000508108 532 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC017037.2-201ENST00000513850 890 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 RN7SKP287-201ENST00000516546 266 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 FAM60DP-201ENST00000524174 632 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC023538.1-201ENST00000534576 736 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFBP01127 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFBP01127 AC022662.1-201ENST00000580252 331 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 MIR2682-201ENST00000580305 110 ntBASIC3.27□□□□□ -1.89
PDGFBP01127 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms