Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AL034408.1-202ENST00000636088 415 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP3BO95985 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 AL022578.1-201ENST00000439330 1433 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 AP002907.1-201ENST00000606361 1430 ntBASIC4.09□□□□□ -1.75
TOP3BO95985 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TOP3BO95985 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TOP3BO95985 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.09□□□□□ -1.76
TOP3BO95985 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TOP3BO95985 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TOP3BO95985 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TOP3BO95985 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOP3BO95985 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOP3BO95985 OR11H4-201ENST00000315409 1082 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOP3BO95985 RNU6-1226P-201ENST00000384317 107 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 ARF4P3-201ENST00000397387 509 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 HMGB1P17-201ENST00000403495 628 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 RNU2-21P-201ENST00000410368 188 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 BX295541.1-201ENST00000417774 250 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 RPL21P111-201ENST00000418453 477 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.08□□□□□ -1.76
TOP3BO95985 AL513174.1-201ENST00000423182 629 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 ELL2P4-201ENST00000446870 1376 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 AC026410.2-201ENST00000460281 156 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 RPL38P1-201ENST00000460914 211 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC079382.1-201ENST00000493346 557 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 RNF138P1-201ENST00000502765 546 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 POU5F1P7-201ENST00000508759 541 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 MTND3P22-201ENST00000510932 243 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC105914.1-201ENST00000511798 226 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC025465.4-201ENST00000513422 638 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 AC104986.1-201ENST00000517978 436 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 FAM92A1P1-201ENST00000528023 890 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.08□□□□□ -1.76
TOP3BO95985 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 RPL21P12-201ENST00000559810 515 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 LARP7P2-201ENST00000575306 125 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 MIR5186-201ENST00000577504 120 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.08□□□□□ -1.76
TOP3BO95985 MAGOH2P-202ENST00000584384 429 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.08□□□□□ -1.76
TOP3BO95985 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AC006378.2-201ENST00000623178 2476 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 AP003122.6-201ENST00000623831 495 ntBASIC4.08□□□□□ -1.76
TOP3BO95985 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TOP3BO95985 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOP3BO95985 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOP3BO95985 ERCC6-202ENST00000374127 1782 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 FARSBP1-201ENST00000435808 1778 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOP3BO95985 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC016769.3-201ENST00000396562 315 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 SSXP10-201ENST00000402595 565 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AL391219.1-201ENST00000422570 483 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 MTCO1P20-201ENST00000425366 358 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP3BO95985 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP3BO95985 NPM1P34-201ENST00000428821 893 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC009961.2-201ENST00000435771 251 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 SNRPEP7-201ENST00000438350 220 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC006011.1-201ENST00000442758 349 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 PRDX3P3-201ENST00000447765 522 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 FABP3P2-201ENST00000453169 399 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 BX322784.1-201ENST00000455793 1077 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TOP3BO95985 HMGB1P21-201ENST00000502313 581 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 TMEM251P1-201ENST00000503717 318 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 KCTD9P5-201ENST00000504141 1170 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC074250.1-201ENST00000511117 192 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 RNU7-143P-201ENST00000516781 65 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 Y_RNA.704-201ENST00000516851 102 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP3BO95985 RPL21P5-201ENST00000554662 472 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.07□□□□□ -1.76
TOP3BO95985 AC009101.1-201ENST00000568135 242 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.07□□□□□ -1.76
TOP3BO95985 MIR544B-201ENST00000582372 78 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC005000.2-201ENST00000605468 310 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC000123.2-201ENST00000623124 461 ntBASIC4.07□□□□□ -1.76
TOP3BO95985 AC110994.2-201ENST00000635481 492 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms