Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.84□□□□□ -1.79
RTN3O95197 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
RTN3O95197 AC002546.1-201ENST00000588041 2504 ntBASIC3.84□□□□□ -1.79
RTN3O95197 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN3O95197 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.84□□□□□ -1.79
RTN3O95197 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 RNU6-501P-201ENST00000364072 100 ntBASIC3.84□□□□□ -1.79
RTN3O95197 Y_RNA.333-201ENST00000365274 102 ntBASIC3.84□□□□□ -1.79
RTN3O95197 U8.14-201ENST00000390843 143 ntBASIC3.84□□□□□ -1.79
RTN3O95197 HMGB3P20-201ENST00000417997 600 ntBASIC3.84□□□□□ -1.79
RTN3O95197 YPEL5P1-201ENST00000419731 367 ntBASIC3.84□□□□□ -1.79
RTN3O95197 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTN3O95197 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN3O95197 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.84□□□□□ -1.79
RTN3O95197 AP002884.2-201ENST00000471647 395 ntBASIC3.84□□□□□ -1.79
RTN3O95197 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.84□□□□□ -1.79
RTN3O95197 CBX3P3-201ENST00000508108 532 ntBASIC3.84□□□□□ -1.79
RTN3O95197 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.84□□□□□ -1.79
RTN3O95197 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.84□□□□□ -1.79
RTN3O95197 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.84□□□□□ -1.79
RTN3O95197 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
RTN3O95197 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.84□□□□□ -1.79
RTN3O95197 UBE2L4-201ENST00000587688 464 ntBASIC3.84□□□□□ -1.79
RTN3O95197 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN3O95197 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.84□□□□□ -1.79
RTN3O95197 AC011468.4-201ENST00000603942 409 ntBASIC3.84□□□□□ -1.79
RTN3O95197 AP002826.1-201ENST00000608835 315 ntBASIC3.84□□□□□ -1.79
RTN3O95197 AL110115.1-201ENST00000614396 364 ntBASIC3.84□□□□□ -1.79
RTN3O95197 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RTN3O95197 AL158801.5-201ENST00000623123 465 ntBASIC3.84□□□□□ -1.79
RTN3O95197 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN3O95197 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
RTN3O95197 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RTN3O95197 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
RTN3O95197 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN3O95197 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN3O95197 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN3O95197 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN3O95197 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 DEFB108F-201ENST00000344638 222 ntBASIC3.83□□□□□ -1.8
RTN3O95197 RNA5SP119-201ENST00000362715 117 ntBASIC3.83□□□□□ -1.8
RTN3O95197 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 RNU6-76P-201ENST00000384060 104 ntBASIC3.83□□□□□ -1.8
RTN3O95197 Y_RNA.560-201ENST00000384689 102 ntBASIC3.83□□□□□ -1.8
RTN3O95197 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 AL031577.2-201ENST00000404133 280 ntBASIC3.83□□□□□ -1.8
RTN3O95197 RNU6-920P-201ENST00000410926 92 ntBASIC3.83□□□□□ -1.8
RTN3O95197 RNU6-516P-201ENST00000411381 104 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AC109780.2-201ENST00000413467 845 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN3O95197 RPS29P4-201ENST00000414733 161 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN3O95197 RPL27AP8-201ENST00000424277 446 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN3O95197 RPL26P6-201ENST00000440913 438 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN3O95197 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AC073387.1-201ENST00000453261 709 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN3O95197 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN3O95197 RN7SKP60-201ENST00000516985 239 ntBASIC3.83□□□□□ -1.8
RTN3O95197 HMGN1P28-201ENST00000521340 364 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN3O95197 DEFB108D-201ENST00000527787 222 ntBASIC3.83□□□□□ -1.8
RTN3O95197 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN3O95197 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN3O95197 AP000403.1-201ENST00000603349 851 ntBASIC3.83□□□□□ -1.8
RTN3O95197 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN3O95197 U3.45-201ENST00000607547 219 ntBASIC3.83□□□□□ -1.8
RTN3O95197 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AL159972.1-201ENST00000625150 448 ntBASIC3.83□□□□□ -1.8
RTN3O95197 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN3O95197 SNORA50A-202ENST00000629536 136 ntBASIC3.83□□□□□ -1.8
RTN3O95197 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN3O95197 AC119674.1-207ENST00000641355 633 ntBASIC3.83□□□□□ -1.8
RTN3O95197 MTND5P33-201ENST00000571250 1450 ntBASIC3.83□□□□□ -1.8
RTN3O95197 CCT4P2-201ENST00000233836 1548 ntBASIC3.83□□□□□ -1.8
RTN3O95197 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN3O95197 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTN3O95197 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN3O95197 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTN3O95197 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN3O95197 AC092125.1-201ENST00000562568 1995 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC012321.1-201ENST00000561622 1588 ntBASIC3.82□□□□□ -1.8
RTN3O95197 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTN3O95197 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN3O95197 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RTN3O95197 SNORD9-201ENST00000362566 104 ntBASIC3.82□□□□□ -1.8
RTN3O95197 SNORA71.3-201ENST00000362582 128 ntBASIC3.82□□□□□ -1.8
RTN3O95197 Y_RNA.97-201ENST00000363094 102 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms