Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL160237.3-201ENST00000604114 1013 ntBASIC0.78□□□□□ -2.28
USH2AO75445 MIR6733-201ENST00000635723 61 ntBASIC0.78□□□□□ -2.28
USH2AO75445 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.78□□□□□ -2.28
USH2AO75445 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC0.78□□□□□ -2.28
USH2AO75445 OFD1P1Y-201ENST00000411756 1225 ntBASIC0.78□□□□□ -2.28
USH2AO75445 HMGB1P11-201ENST00000413899 637 ntBASIC0.78□□□□□ -2.28
USH2AO75445 RPL23AP35-201ENST00000451906 501 ntBASIC0.78□□□□□ -2.28
USH2AO75445 AC025033.1-201ENST00000463883 194 ntBASIC0.78□□□□□ -2.28
USH2AO75445 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC0.78□□□□□ -2.28
USH2AO75445 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC0.78□□□□□ -2.28
USH2AO75445 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
USH2AO75445 AC024560.3-201ENST00000608482 349 ntBASIC0.78□□□□□ -2.28
USH2AO75445 AL109933.3-201ENST00000619095 188 ntBASIC0.78□□□□□ -2.28
USH2AO75445 AC009501.3-201ENST00000605001 1352 ntBASIC0.78□□□□□ -2.28
USH2AO75445 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC0.78□□□□□ -2.28
USH2AO75445 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
USH2AO75445 AC121333.1-201ENST00000567488 2709 ntBASIC0.78□□□□□ -2.29
USH2AO75445 TMEM161BP1-201ENST00000457388 1457 ntBASIC0.78□□□□□ -2.29
USH2AO75445 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
USH2AO75445 Y_RNA.167-201ENST00000363735 109 ntBASIC0.78□□□□□ -2.29
USH2AO75445 RNU6-60P-201ENST00000364792 103 ntBASIC0.78□□□□□ -2.29
USH2AO75445 MTND2P9-201ENST00000422293 931 ntBASIC0.78□□□□□ -2.29
USH2AO75445 AL354695.1-201ENST00000427935 228 ntBASIC0.78□□□□□ -2.29
USH2AO75445 RPL23AP20-201ENST00000447965 421 ntBASIC0.78□□□□□ -2.29
USH2AO75445 RNU6-405P-201ENST00000516637 110 ntBASIC0.78□□□□□ -2.29
USH2AO75445 RNU6-467P-201ENST00000517027 110 ntBASIC0.78□□□□□ -2.29
USH2AO75445 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.78□□□□□ -2.29
USH2AO75445 AL035411.2-201ENST00000604022 421 ntBASIC0.78□□□□□ -2.29
USH2AO75445 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC0.78□□□□□ -2.29
USH2AO75445 RNA5SP27-201ENST00000363839 119 ntBASIC0.77□□□□□ -2.29
USH2AO75445 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
USH2AO75445 DEFA7P-201ENST00000382676 285 ntBASIC0.77□□□□□ -2.29
USH2AO75445 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.77□□□□□ -2.29
USH2AO75445 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.77□□□□□ -2.29
USH2AO75445 MIR3186-201ENST00000577404 85 ntBASIC0.77□□□□□ -2.29
USH2AO75445 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.77□□□□□ -2.29
USH2AO75445 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
USH2AO75445 SNORA40.6-201ENST00000391153 128 ntBASIC0.77□□□□□ -2.29
USH2AO75445 RPL36AP6-201ENST00000435770 321 ntBASIC0.77□□□□□ -2.29
USH2AO75445 USP9YP15-201ENST00000442391 422 ntBASIC0.77□□□□□ -2.29
USH2AO75445 AC245517.2-201ENST00000442890 346 ntBASIC0.77□□□□□ -2.29
USH2AO75445 RPS27AP10-201ENST00000496103 208 ntBASIC0.77□□□□□ -2.29
USH2AO75445 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 AC105313.1-201ENST00000509121 353 ntBASIC0.77□□□□□ -2.29
USH2AO75445 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.77□□□□□ -2.29
USH2AO75445 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC0.77□□□□□ -2.29
USH2AO75445 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
USH2AO75445 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.77□□□□□ -2.29
USH2AO75445 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC0.77□□□□□ -2.29
USH2AO75445 AF131216.2-201ENST00000512316 564 ntBASIC0.77□□□□□ -2.29
USH2AO75445 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.77□□□□□ -2.29
USH2AO75445 AC096772.1-201ENST00000609146 564 ntBASIC0.77□□□□□ -2.29
USH2AO75445 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
USH2AO75445 MTND4P1-201ENST00000457501 1466 ntBASIC0.77□□□□□ -2.29
USH2AO75445 RPL30P3-201ENST00000424262 333 ntBASIC0.77□□□□□ -2.29
USH2AO75445 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC0.77□□□□□ -2.29
USH2AO75445 AC022447.3-201ENST00000506865 495 ntBASIC0.77□□□□□ -2.29
USH2AO75445 AC109446.2-201ENST00000567872 497 ntBASIC0.77□□□□□ -2.29
USH2AO75445 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.77□□□□□ -2.29
USH2AO75445 VN1R7P-201ENST00000619242 903 ntBASIC0.77□□□□□ -2.29
USH2AO75445 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
USH2AO75445 HMGB1P5-201ENST00000255320 642 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RPL23AP39-201ENST00000415533 405 ntBASIC0.76□□□□□ -2.29
USH2AO75445 CYCSP48-201ENST00000417124 323 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RN7SL297P-201ENST00000483161 293 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AC023813.2-201ENST00000564321 469 ntBASIC0.76□□□□□ -2.29
USH2AO75445 VIS1.1-201ENST00000610517 203 ntBASIC0.76□□□□□ -2.29
USH2AO75445 STMN1P1-201ENST00000617809 440 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RBM12B-AS1-201ENST00000623283 653 ntBASIC0.76□□□□□ -2.29
USH2AO75445 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
USH2AO75445 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
USH2AO75445 AL121972.1-201ENST00000402023 252 ntBASIC0.76□□□□□ -2.29
USH2AO75445 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC0.76□□□□□ -2.29
USH2AO75445 AC009965.2-201ENST00000425328 970 ntBASIC0.76□□□□□ -2.29
USH2AO75445 FABP5P3-201ENST00000437960 408 ntBASIC0.76□□□□□ -2.29
USH2AO75445 EIF2S2P4-201ENST00000461070 984 ntBASIC0.76□□□□□ -2.29
USH2AO75445 SNORA70.14-201ENST00000516205 110 ntBASIC0.76□□□□□ -2.29
USH2AO75445 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
USH2AO75445 AC055876.1-202ENST00000567053 138 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC0.76□□□□□ -2.29
USH2AO75445 AL157834.3-201ENST00000615543 103 ntBASIC0.76□□□□□ -2.29
USH2AO75445 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.76□□□□□ -2.29
USH2AO75445 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
USH2AO75445 RNU4-51P-201ENST00000364206 140 ntBASIC0.76□□□□□ -2.29
USH2AO75445 RN7SKP200-201ENST00000410564 320 ntBASIC0.76□□□□□ -2.29
USH2AO75445 XKRYP4-201ENST00000414395 483 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AC017078.1-201ENST00000416146 368 ntBASIC0.76□□□□□ -2.29
USH2AO75445 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC0.76□□□□□ -2.29
USH2AO75445 AL445669.1-201ENST00000426743 755 ntBASIC0.76□□□□□ -2.29
USH2AO75445 AL390023.1-201ENST00000428836 262 ntBASIC0.76□□□□□ -2.29
USH2AO75445 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
USH2AO75445 XKRYP5-201ENST00000449659 483 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms