Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC008507.1-201ENST00000587506 734 ntBASIC3.1□□□□□ -1.91
SDC3O75056 VN1R78P-201ENST00000597393 564 ntBASIC3.1□□□□□ -1.91
SDC3O75056 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.1□□□□□ -1.91
SDC3O75056 AC004987.4-201ENST00000603383 338 ntBASIC3.1□□□□□ -1.91
SDC3O75056 AL450336.1-201ENST00000605180 586 ntBASIC3.1□□□□□ -1.91
SDC3O75056 AC131235.4-201ENST00000609288 620 ntBASIC3.1□□□□□ -1.91
SDC3O75056 AP000240.1-201ENST00000609910 452 ntBASIC3.1□□□□□ -1.91
SDC3O75056 AC006386.1-201ENST00000619436 415 ntBASIC3.1□□□□□ -1.91
SDC3O75056 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDC3O75056 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
SDC3O75056 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.1□□□□□ -1.91
SDC3O75056 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.1□□□□□ -1.91
SDC3O75056 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDC3O75056 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDC3O75056 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SDC3O75056 AC009487.2-201ENST00000420969 6821 ntBASIC3.09□□□□□ -1.91
SDC3O75056 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDC3O75056 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
SDC3O75056 OR1S2-201ENST00000302592 978 ntBASIC3.09□□□□□ -1.91
SDC3O75056 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDC3O75056 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
SDC3O75056 DHFRP6-201ENST00000401776 268 ntBASIC3.09□□□□□ -1.91
SDC3O75056 FAT1P1-201ENST00000406588 507 ntBASIC3.09□□□□□ -1.91
SDC3O75056 U3.42-201ENST00000408746 214 ntBASIC3.09□□□□□ -1.91
SDC3O75056 RNA5SP107-201ENST00000411358 122 ntBASIC3.09□□□□□ -1.91
SDC3O75056 SSR1P2-201ENST00000415208 787 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDC3O75056 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.09□□□□□ -1.91
SDC3O75056 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.09□□□□□ -1.91
SDC3O75056 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
SDC3O75056 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
SDC3O75056 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
SDC3O75056 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
SDC3O75056 COX7BP2-201ENST00000437976 242 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.09□□□□□ -1.91
SDC3O75056 CR769776.1-201ENST00000441254 787 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AL121871.1-201ENST00000443413 436 ntBASIC3.09□□□□□ -1.91
SDC3O75056 RAC1P7-201ENST00000445367 377 ntBASIC3.09□□□□□ -1.91
SDC3O75056 PTENP1-201ENST00000447117 1215 ntBASIC3.09□□□□□ -1.91
SDC3O75056 MTCO3P11-201ENST00000455103 774 ntBASIC3.09□□□□□ -1.91
SDC3O75056 SNORD11.1-201ENST00000459482 85 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC097493.1-201ENST00000463958 372 ntBASIC3.09□□□□□ -1.91
SDC3O75056 MTND1P16-201ENST00000465177 898 ntBASIC3.09□□□□□ -1.91
SDC3O75056 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.09□□□□□ -1.91
SDC3O75056 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.09□□□□□ -1.91
SDC3O75056 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.09□□□□□ -1.91
SDC3O75056 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.09□□□□□ -1.91
SDC3O75056 FABP5P12-201ENST00000515543 389 ntBASIC3.09□□□□□ -1.91
SDC3O75056 RNU6-311P-201ENST00000516224 102 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.09□□□□□ -1.91
SDC3O75056 AC022861.1-201ENST00000522981 663 ntBASIC3.09□□□□□ -1.91
SDC3O75056 PSMA2P1-201ENST00000526365 646 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDC3O75056 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDC3O75056 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.09□□□□□ -1.91
SDC3O75056 MTND4P33-201ENST00000556706 766 ntBASIC3.09□□□□□ -1.91
SDC3O75056 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.09□□□□□ -1.91
SDC3O75056 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
SDC3O75056 AP005205.1-201ENST00000563503 508 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC009712.1-201ENST00000564938 316 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AL512347.1-201ENST00000566420 503 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC012443.1-201ENST00000605605 231 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC007998.5-201ENST00000622938 237 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SDC3O75056 AC116618.1-201ENST00000634617 774 ntBASIC3.09□□□□□ -1.91
SDC3O75056 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
SDC3O75056 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.09□□□□□ -1.91
SDC3O75056 MTND5P24-201ENST00000438892 1767 ntBASIC3.09□□□□□ -1.91
SDC3O75056 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SDC3O75056 MAPK10-362ENST00000641864 4484 ntBASIC3.09□□□□□ -1.92
SDC3O75056 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SDC3O75056 AL356473.1-201ENST00000406203 1408 ntBASIC3.09□□□□□ -1.92
SDC3O75056 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SDC3O75056 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SDC3O75056 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SDC3O75056 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SDC3O75056 SNORA7.4-201ENST00000384249 137 ntBASIC3.08□□□□□ -1.92
SDC3O75056 MIR493-201ENST00000385254 89 ntBASIC3.08□□□□□ -1.92
SDC3O75056 ANAPC10P1-201ENST00000395991 556 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AL136372.1-201ENST00000403060 228 ntBASIC3.08□□□□□ -1.92
SDC3O75056 RNU6-1077P-201ENST00000410506 102 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.08□□□□□ -1.92
SDC3O75056 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
SDC3O75056 MTATP6P27-201ENST00000416987 621 ntBASIC3.08□□□□□ -1.92
SDC3O75056 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AC245291.1-201ENST00000419501 328 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.08□□□□□ -1.92
SDC3O75056 AC233728.2-201ENST00000425348 757 ntBASIC3.08□□□□□ -1.92
SDC3O75056 MTCO2P20-201ENST00000437339 673 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.08□□□□□ -1.92
SDC3O75056 HSPE1P28-201ENST00000443139 211 ntBASIC3.08□□□□□ -1.92
SDC3O75056 OR6K5P-201ENST00000447050 945 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.08□□□□□ -1.92
SDC3O75056 RPL7P5-201ENST00000471472 736 ntBASIC3.08□□□□□ -1.92
SDC3O75056 AC021146.8-201ENST00000507455 733 ntBASIC3.08□□□□□ -1.92
SDC3O75056 MTND4LP22-201ENST00000508209 276 ntBASIC3.08□□□□□ -1.92
SDC3O75056 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.08□□□□□ -1.92
SDC3O75056 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.08□□□□□ -1.92
SDC3O75056 RN7SKP272-201ENST00000516988 232 ntBASIC3.08□□□□□ -1.92
SDC3O75056 OR5AK1P-201ENST00000524837 922 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms