Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC244258.1-201ENST00000637553 1071 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AL513478.4-201ENST00000641636 310 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTNND1O60716 AC092447.7-201ENST00000422212 1621 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 AL138713.1-201ENST00000624026 2130 ntBASIC4.49□□□□□ -1.69
CTNND1O60716 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNND1O60716 AC004925.1-201ENST00000624256 2706 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNND1O60716 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CTNND1O60716 RNA5SP51-201ENST00000364750 119 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 RNY4P34-201ENST00000364779 95 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNND1O60716 PTMAP5-201ENST00000393073 333 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 RNU2-66P-201ENST00000410650 161 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AC009961.2-201ENST00000435771 251 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 ATP5C1P1-201ENST00000441945 895 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AL121871.1-201ENST00000443413 436 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNND1O60716 AP000926.1-201ENST00000479573 241 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 RN7SL293P-201ENST00000481765 281 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 IGKV2-23-201ENST00000518729 323 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNND1O60716 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.48□□□□□ -1.69
CTNND1O60716 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNND1O60716 MIR3118-1-201ENST00000581787 76 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 ZNF415P1-201ENST00000582279 1166 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 SNORD84-203ENST00000584275 78 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 MIR3922-201ENST00000585192 84 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AC244505.7-201ENST00000599675 272 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AC012603.1-201ENST00000606424 528 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNND1O60716 AC013562.2-201ENST00000611632 603 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 AL159972.1-201ENST00000625150 448 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 PISRT1-201ENST00000626175 531 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNND1O60716 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CTNND1O60716 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNND1O60716 AC018529.3-201ENST00000624212 2254 ntBASIC4.48□□□□□ -1.69
CTNND1O60716 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNND1O60716 GNG5P1-201ENST00000255500 204 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTNND1O60716 U8.3-201ENST00000363321 132 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 RNA5SP72-201ENST00000364442 117 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNND1O60716 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.47□□□□□ -1.69
CTNND1O60716 RNU2-8P-201ENST00000410727 190 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 RNA5SP306-201ENST00000411087 107 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 RNU6-516P-201ENST00000411381 104 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNND1O60716 C1DP2-201ENST00000418167 426 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNND1O60716 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNND1O60716 RPS6P12-201ENST00000432491 726 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNND1O60716 AL121877.1-201ENST00000453704 622 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC096751.1-202ENST00000502691 1067 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.47□□□□□ -1.69
CTNND1O60716 SNORA31.20-201ENST00000517111 133 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNND1O60716 HMGN1P28-201ENST00000521340 364 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AP003033.1-201ENST00000527244 415 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNND1O60716 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTNND1O60716 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.47□□□□□ -1.69
CTNND1O60716 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNND1O60716 AP001429.1-201ENST00000602568 530 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 DUXAP4-201ENST00000603046 613 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AL391813.2-201ENST00000609113 322 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC091834.1-201ENST00000614543 472 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC103858.2-201ENST00000621471 543 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AL359740.1-201ENST00000624340 592 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 AC110994.2-201ENST00000635481 492 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNND1O60716 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNND1O60716 AC018555.1-201ENST00000567548 1980 ntBASIC4.47□□□□□ -1.69
CTNND1O60716 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNND1O60716 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTNND1O60716 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
CTNND1O60716 AL157700.1-201ENST00000561973 1432 ntBASIC4.46□□□□□ -1.69
CTNND1O60716 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.46□□□□□ -1.69
CTNND1O60716 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTNND1O60716 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CTNND1O60716 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CTNND1O60716 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNND1O60716 RNU6-1074P-201ENST00000383995 104 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 RNU6-637P-201ENST00000384050 107 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 MIR19A-201ENST00000384878 82 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 RNU6-754P-201ENST00000391166 107 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 RN7SKP177-201ENST00000410567 355 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNND1O60716 AC010975.2-201ENST00000427781 588 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 AP000907.1-201ENST00000428428 510 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNND1O60716 RPL35AP22-201ENST00000436855 335 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNND1O60716 FTH1P1-201ENST00000437933 532 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 RPS3AP12-201ENST00000443616 753 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 TPT1P14-201ENST00000448018 505 ntBASIC4.46□□□□□ -1.7
CTNND1O60716 MTCYBP1-201ENST00000454315 1119 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms