Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 RPS12P10-201ENST00000427031 377 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXS1O43638 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXS1O43638 RPS26P2-201ENST00000440331 348 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 RPL21P133-201ENST00000443666 476 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AL035666.1-201ENST00000446195 348 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXS1O43638 MTCO3P10-201ENST00000455912 772 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 RPL30P15-201ENST00000457129 321 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AL162395.1-201ENST00000457882 422 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 SNORD121B-201ENST00000458838 81 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 RPL21P126-201ENST00000470049 478 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 TRBVA-201ENST00000498804 316 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXS1O43638 MTND4LP22-201ENST00000508209 276 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXS1O43638 RAB9BP1-201ENST00000519581 626 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AP000763.2-201ENST00000540641 163 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXS1O43638 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXS1O43638 GSTP1P1-201ENST00000548078 319 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXS1O43638 AC018552.1-201ENST00000562099 811 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 MIR4675-201ENST00000577898 77 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
FOXS1O43638 MIR3672-201ENST00000584290 82 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AF038458.1-201ENST00000588406 262 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXS1O43638 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 U4.1-201ENST00000620349 87 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AP005019.3-201ENST00000620418 560 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AP000843.1-201ENST00000624880 701 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 AC009313.2-201ENST00000417893 1941 ntBASIC4.28□□□□□ -1.72
FOXS1O43638 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
FOXS1O43638 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXS1O43638 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXS1O43638 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXS1O43638 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FOXS1O43638 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
FOXS1O43638 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXS1O43638 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FOXS1O43638 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
FOXS1O43638 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXS1O43638 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXS1O43638 AC126755.2-208ENST00000327792 462 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AC138969.1-213ENST00000331436 462 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 RNA5SP447-201ENST00000363749 119 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 Y_RNA.482-201ENST00000384377 111 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 MIR141-201ENST00000384975 95 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 RNU6-278P-201ENST00000390945 109 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 Y_RNA.618-201ENST00000410949 107 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 RNU6-954P-201ENST00000411355 107 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 VDAC1P9-201ENST00000412766 841 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXS1O43638 MTCYBP10-201ENST00000424905 650 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXS1O43638 AL031736.2-201ENST00000426573 787 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXS1O43638 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXS1O43638 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXS1O43638 CYCSP34-201ENST00000458172 304 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXS1O43638 RPL7P43-201ENST00000478876 753 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXS1O43638 AL139099.1-201ENST00000497398 403 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 RPS27P27-201ENST00000498779 255 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXS1O43638 RNA5SP446-201ENST00000515955 82 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 RNU6-256P-201ENST00000516747 97 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 HMGB1P19-201ENST00000517578 577 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXS1O43638 HIGD1AP5-201ENST00000529959 259 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 AL137161.1-201ENST00000532231 390 ntBASIC4.27□□□□□ -1.73
FOXS1O43638 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXS1O43638 AL390726.5-202ENST00000564800 256 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms