Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC9.28□□□□□ -0.92
MSH5O43196 MIR6071-201ENST00000616741 78 ntBASIC9.28□□□□□ -0.92
MSH5O43196 AL161420.1-201ENST00000619393 264 ntBASIC9.28□□□□□ -0.92
MSH5O43196 MRPL57P1-201ENST00000621486 265 ntBASIC9.28□□□□□ -0.92
MSH5O43196 AC007546.2-201ENST00000623996 360 ntBASIC9.28□□□□□ -0.92
MSH5O43196 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MSH5O43196 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
MSH5O43196 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.27□□□□□ -0.92
MSH5O43196 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC9.27□□□□□ -0.92
MSH5O43196 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.27□□□□□ -0.93
MSH5O43196 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MSH5O43196 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MSH5O43196 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MSH5O43196 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
MSH5O43196 RNA5SP176-201ENST00000390956 110 ntBASIC9.27□□□□□ -0.93
MSH5O43196 SNORA36B-201ENST00000410438 131 ntBASIC9.27□□□□□ -0.93
MSH5O43196 RNU4-69P-201ENST00000410677 143 ntBASIC9.27□□□□□ -0.93
MSH5O43196 RNU6-938P-201ENST00000411285 103 ntBASIC9.27□□□□□ -0.93
MSH5O43196 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC9.27□□□□□ -0.93
MSH5O43196 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC9.27□□□□□ -0.93
MSH5O43196 RN7SL643P-201ENST00000471845 291 ntBASIC9.27□□□□□ -0.93
MSH5O43196 RN7SL751P-201ENST00000473281 284 ntBASIC9.27□□□□□ -0.93
MSH5O43196 RN7SL568P-201ENST00000493069 298 ntBASIC9.27□□□□□ -0.93
MSH5O43196 AC093259.1-201ENST00000509755 300 ntBASIC9.27□□□□□ -0.93
MSH5O43196 Y_RNA.659-201ENST00000515994 113 ntBASIC9.27□□□□□ -0.93
MSH5O43196 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC9.27□□□□□ -0.93
MSH5O43196 RNA5SP439-201ENST00000617595 124 ntBASIC9.27□□□□□ -0.93
MSH5O43196 AC087894.3-201ENST00000623682 349 ntBASIC9.27□□□□□ -0.93
MSH5O43196 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
MSH5O43196 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MSH5O43196 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.93
MSH5O43196 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
MSH5O43196 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC9.26□□□□□ -0.93
MSH5O43196 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 COG2-209ENST00000534989 2963 ntTSL 2 BASIC9.26□□□□□ -0.93
MSH5O43196 AC110716.2-201ENST00000563865 3945 ntBASIC9.26□□□□□ -0.93
MSH5O43196 ST7-203ENST00000393443 2360 ntTSL 2 BASIC9.26□□□□□ -0.93
MSH5O43196 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 SNORA7A-201ENST00000384765 139 ntBASIC9.26□□□□□ -0.93
MSH5O43196 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 RNU4-64P-201ENST00000410795 131 ntBASIC9.26□□□□□ -0.93
MSH5O43196 RNA5SP127-201ENST00000411051 133 ntBASIC9.26□□□□□ -0.93
MSH5O43196 CYCSP19-201ENST00000411715 316 ntBASIC9.26□□□□□ -0.93
MSH5O43196 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC9.26□□□□□ -0.93
MSH5O43196 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.26□□□□□ -0.93
MSH5O43196 PPIAP19-201ENST00000486414 492 ntBASIC9.26□□□□□ -0.93
MSH5O43196 AC117454.1-201ENST00000491120 168 ntBASIC9.26□□□□□ -0.93
MSH5O43196 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC9.26□□□□□ -0.93
MSH5O43196 MIR3157-201ENST00000578688 85 ntBASIC9.26□□□□□ -0.93
MSH5O43196 AC012531.4-201ENST00000616509 177 ntBASIC9.26□□□□□ -0.93
MSH5O43196 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC9.26□□□□□ -0.93
MSH5O43196 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.93
MSH5O43196 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC9.26□□□□□ -0.93
MSH5O43196 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 OLMALINC-203ENST00000641087 3779 ntBASIC9.26□□□□□ -0.93
MSH5O43196 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
MSH5O43196 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
MSH5O43196 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 AC097461.1-201ENST00000568928 2821 ntBASIC9.25□□□□□ -0.93
MSH5O43196 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.25□□□□□ -0.93
MSH5O43196 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
MSH5O43196 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 MIR624-201ENST00000385217 97 ntBASIC9.25□□□□□ -0.93
MSH5O43196 SNORA48.5-201ENST00000391143 135 ntBASIC9.25□□□□□ -0.93
MSH5O43196 AC004941.2-201ENST00000427009 228 ntBASIC9.25□□□□□ -0.93
MSH5O43196 AC090774.1-201ENST00000435925 246 ntBASIC9.25□□□□□ -0.93
MSH5O43196 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 CYCSP51-201ENST00000443545 318 ntBASIC9.25□□□□□ -0.93
MSH5O43196 RN7SL70P-201ENST00000478322 302 ntBASIC9.25□□□□□ -0.93
MSH5O43196 AC011406.1-201ENST00000512440 370 ntBASIC9.25□□□□□ -0.93
MSH5O43196 RNA5SP236-201ENST00000516169 116 ntBASIC9.25□□□□□ -0.93
MSH5O43196 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 MIR3154-201ENST00000577829 84 ntBASIC9.25□□□□□ -0.93
MSH5O43196 MIR4437-201ENST00000581331 60 ntBASIC9.25□□□□□ -0.93
MSH5O43196 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 AL121809.2-201ENST00000613169 341 ntBASIC9.25□□□□□ -0.93
MSH5O43196 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms