Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 SNORD53-201ENST00000579969 78 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 VN1R88P-201ENST00000596787 292 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AC002487.1-201ENST00000604565 994 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC112503.2-201ENST00000609005 552 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGB3O15347 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC009318.4-201ENST00000620496 486 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGB3O15347 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMGB3O15347 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.9□□□□□ -2.11
HMGB3O15347 RNU6-1155P-201ENST00000363554 107 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 SNORA27.3-201ENST00000364937 134 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 TAF9BP2-201ENST00000400856 499 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AL355497.1-201ENST00000406262 551 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC098614.2-201ENST00000426040 255 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 TRBV26-201ENST00000456572 344 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 BX510359.1-201ENST00000456973 237 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 KLRA1P-201ENST00000503499 986 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 MRPS36P2-201ENST00000512569 299 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 ATP5F1P5-201ENST00000526403 760 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 CCNG2P1-201ENST00000549521 1000 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGB3O15347 AC079791.1-201ENST00000605356 973 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC009032.1-201ENST00000617574 431 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC091925.2-201ENST00000625059 256 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGB3O15347 AC004944.1-201ENST00000517807 3059 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 AC069528.2-201ENST00000624849 1991 ntBASIC1.9□□□□□ -2.11
HMGB3O15347 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HMGB3O15347 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMGB3O15347 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
HMGB3O15347 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMGB3O15347 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMGB3O15347 RNU6-252P-201ENST00000363232 107 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 MIR767-201ENST00000390228 109 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB3O15347 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGB3O15347 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGB3O15347 AL512649.1-201ENST00000428997 581 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGB3O15347 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGB3O15347 RPS24P13-201ENST00000442520 397 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.89□□□□□ -2.11
HMGB3O15347 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HMGB3O15347 AC104164.3-201ENST00000467363 1258 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 AC004263.1-201ENST00000479327 332 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 GTF2IP9-201ENST00000502460 301 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB3O15347 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGB3O15347 XKRY-201ENST00000510392 1100 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 AC107222.1-201ENST00000510899 637 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 RNU6-760P-201ENST00000516078 97 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 RNU6-928P-201ENST00000516876 104 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 RNU6-798P-201ENST00000516912 103 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGB3O15347 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB3O15347 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGB3O15347 AGGF1P5-201ENST00000567900 919 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB3O15347 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HMGB3O15347 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.89□□□□□ -2.11
HMGB3O15347 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
HMGB3O15347 HSPE1P11-201ENST00000339579 310 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 DEFB108F-201ENST00000344638 222 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 RNA5SP72-201ENST00000364442 117 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 RNU1-140P-201ENST00000365040 165 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 RNU6-40P-201ENST00000384254 107 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 MIR449B-201ENST00000384995 97 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 RNU6-882P-201ENST00000391025 103 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL122016.1-201ENST00000403365 367 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL024507.1-201ENST00000412741 274 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGB3O15347 WARS2P1-201ENST00000429678 537 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 FGF7P5-201ENST00000441829 291 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AL135938.1-201ENST00000443141 297 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 NANOGNBP1-201ENST00000448444 480 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AP001992.1-205ENST00000462248 379 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC097493.1-201ENST00000463958 372 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 RPL23AP45-201ENST00000476406 468 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC108734.3-201ENST00000481241 1165 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGB3O15347 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.88□□□□□ -2.11
HMGB3O15347 DEFB108D-201ENST00000527787 222 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AP000889.2-201ENST00000532684 490 ntBASIC1.88□□□□□ -2.11
HMGB3O15347 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGB3O15347 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMGB3O15347 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGB3O15347 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGB3O15347 RPL23AP84-201ENST00000571193 464 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms