Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HMGN1P28-201ENST00000521340 364 ntBASIC2.76□□□□□ -1.97
CHD1O14646 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD1O14646 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD1O14646 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.76□□□□□ -1.97
CHD1O14646 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHD1O14646 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.76□□□□□ -1.97
CHD1O14646 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CHD1O14646 AMD1P1-201ENST00000457220 922 ntBASIC2.76□□□□□ -1.97
CHD1O14646 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHD1O14646 AC107398.1-201ENST00000486904 505 ntBASIC2.76□□□□□ -1.97
CHD1O14646 TBCAP3-201ENST00000512475 312 ntBASIC2.76□□□□□ -1.97
CHD1O14646 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.76□□□□□ -1.97
CHD1O14646 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHD1O14646 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.76□□□□□ -1.97
CHD1O14646 RNU6-1-201ENST00000383898 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-42P-201ENST00000384165 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-36P-201ENST00000384172 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-4P-201ENST00000384205 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-5P-201ENST00000384238 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-3P-201ENST00000384314 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-2-201ENST00000384627 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-9-201ENST00000384776 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-33P-201ENST00000384793 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-174P-201ENST00000410406 106 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RN7SKP101-201ENST00000411376 320 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RSL24D1P2-201ENST00000445584 366 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RPL34P26-201ENST00000445636 354 ntBASIC2.75□□□□□ -1.97
CHD1O14646 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.75□□□□□ -1.97
CHD1O14646 AC087190.1-201ENST00000484462 480 ntBASIC2.75□□□□□ -1.97
CHD1O14646 AC034244.1-201ENST00000507687 207 ntBASIC2.75□□□□□ -1.97
CHD1O14646 AC004486.1-201ENST00000546846 233 ntBASIC2.75□□□□□ -1.97
CHD1O14646 RNU6-6P-201ENST00000606623 107 ntBASIC2.75□□□□□ -1.97
CHD1O14646 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.74□□□□□ -1.97
CHD1O14646 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.74□□□□□ -1.97
CHD1O14646 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.74□□□□□ -1.97
CHD1O14646 RPS15AP36-201ENST00000492022 382 ntBASIC2.74□□□□□ -1.97
CHD1O14646 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.74□□□□□ -1.97
CHD1O14646 ARL4AP2-201ENST00000507378 601 ntBASIC2.74□□□□□ -1.97
CHD1O14646 AC006390.1-201ENST00000508068 283 ntBASIC2.74□□□□□ -1.97
CHD1O14646 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.74□□□□□ -1.97
CHD1O14646 AC104986.1-201ENST00000517978 436 ntBASIC2.74□□□□□ -1.97
CHD1O14646 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.74□□□□□ -1.97
CHD1O14646 ABI1P1-201ENST00000603375 1120 ntBASIC2.74□□□□□ -1.97
CHD1O14646 CR382285.2-201ENST00000624662 1495 ntBASIC2.74□□□□□ -1.97
CHD1O14646 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHD1O14646 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.73□□□□□ -1.97
CHD1O14646 Z99714.1-201ENST00000450463 807 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC092155.2-201ENST00000454675 477 ntBASIC2.73□□□□□ -1.97
CHD1O14646 RPS15AP1-201ENST00000457423 391 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC239860.2-201ENST00000525886 270 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.73□□□□□ -1.97
CHD1O14646 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.73□□□□□ -1.97
CHD1O14646 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.73□□□□□ -1.97
CHD1O14646 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
CHD1O14646 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHD1O14646 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHD1O14646 Y_RNA.374-201ENST00000365606 101 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.73□□□□□ -1.97
CHD1O14646 AC008526.1-201ENST00000509149 338 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC021146.7-201ENST00000509604 775 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC022790.1-201ENST00000522872 204 ntBASIC2.73□□□□□ -1.97
CHD1O14646 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.73□□□□□ -1.97
CHD1O14646 OR4G1P-201ENST00000588632 938 ntBASIC2.73□□□□□ -1.97
CHD1O14646 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
CHD1O14646 TAS2R15P-201ENST00000390674 928 ntBASIC2.72□□□□□ -1.97
CHD1O14646 AL136133.1-201ENST00000413694 376 ntBASIC2.72□□□□□ -1.97
CHD1O14646 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.72□□□□□ -1.97
CHD1O14646 RAD23BP2-201ENST00000416003 1207 ntBASIC2.72□□□□□ -1.97
CHD1O14646 AC073310.1-201ENST00000423226 1033 ntBASIC2.72□□□□□ -1.97
CHD1O14646 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.72□□□□□ -1.97
CHD1O14646 RNA5SP402-201ENST00000517148 110 ntBASIC2.72□□□□□ -1.97
CHD1O14646 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.72□□□□□ -1.97
CHD1O14646 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CHD1O14646 AC015720.1-201ENST00000565251 277 ntBASIC2.72□□□□□ -1.97
CHD1O14646 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CHD1O14646 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD1O14646 METTL21EP-201ENST00000298105 713 ntBASIC2.71□□□□□ -1.98
CHD1O14646 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
CHD1O14646 RNU6-342P-201ENST00000384521 104 ntBASIC2.71□□□□□ -1.98
CHD1O14646 AL121972.1-201ENST00000402023 252 ntBASIC2.71□□□□□ -1.98
CHD1O14646 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD1O14646 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD1O14646 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.71□□□□□ -1.98
CHD1O14646 RN7SKP34-201ENST00000516142 244 ntBASIC2.71□□□□□ -1.98
CHD1O14646 AC011604.1-201ENST00000545978 196 ntBASIC2.71□□□□□ -1.98
CHD1O14646 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD1O14646 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD1O14646 AL078603.1-201ENST00000603824 313 ntBASIC2.71□□□□□ -1.98
CHD1O14646 AC126118.1-201ENST00000607744 628 ntBASIC2.71□□□□□ -1.98
CHD1O14646 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.71□□□□□ -1.98
CHD1O14646 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD1O14646 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHD1O14646 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHD1O14646 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHD1O14646 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.71□□□□□ -1.98
CHD1O14646 AC009474.2-201ENST00000451383 136 ntBASIC2.71□□□□□ -1.98
CHD1O14646 GTF2IP9-201ENST00000502460 301 ntBASIC2.71□□□□□ -1.98
CHD1O14646 MIR4716-201ENST00000579628 84 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms