Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
RFXAPO00287 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
RFXAPO00287 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
RFXAPO00287 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RFXAPO00287 MTND5P10-201ENST00000603719 1809 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.81□□□□□ -1.64
RFXAPO00287 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 RNU6-238P-201ENST00000363313 106 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 Y_RNA.135-201ENST00000363439 95 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 RNY1P12-201ENST00000364251 105 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 RNU4-48P-201ENST00000365559 182 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 DEFB109C-201ENST00000382575 264 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 DEFB109B-201ENST00000382656 264 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 RNU6-209P-201ENST00000384118 107 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 SNORD3H-201ENST00000384486 214 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 Y_RNA.574-201ENST00000384766 95 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.81□□□□□ -1.64
RFXAPO00287 AC012065.2-201ENST00000421295 375 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC073069.1-201ENST00000428657 441 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC096644.2-201ENST00000429278 159 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 HMGB1P12-201ENST00000438594 598 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 TXNP1-201ENST00000441872 371 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 RPL21P89-201ENST00000444021 467 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 DDX3P2-201ENST00000446138 111 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC079781.2-201ENST00000446424 169 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC020550.1-201ENST00000447385 163 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.81□□□□□ -1.64
RFXAPO00287 AC079804.1-201ENST00000461922 436 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 RPL7P43-201ENST00000478876 753 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AL049874.2-201ENST00000492636 288 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC104564.1-201ENST00000493028 407 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.81□□□□□ -1.64
RFXAPO00287 RNU6-635P-201ENST00000516651 102 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC009902.1-201ENST00000519351 183 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.81□□□□□ -1.64
RFXAPO00287 AC023442.1-201ENST00000531247 422 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC109635.4-202ENST00000531666 412 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AP002404.1-201ENST00000532005 451 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.81□□□□□ -1.64
RFXAPO00287 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.81□□□□□ -1.64
RFXAPO00287 NCAPGP2-201ENST00000557911 754 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 HSPE1P3-201ENST00000559254 309 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.81□□□□□ -1.64
RFXAPO00287 MIR3944-201ENST00000581277 108 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 MIR4472-2-201ENST00000582069 67 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RFXAPO00287 AC039056.2-201ENST00000622261 511 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.81□□□□□ -1.64
RFXAPO00287 AL158163.1-201ENST00000603915 1649 ntBASIC4.81□□□□□ -1.64
RFXAPO00287 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RFXAPO00287 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.81□□□□□ -1.64
RFXAPO00287 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.81□□□□□ -1.64
RFXAPO00287 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFXAPO00287 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 ZFRP1-201ENST00000457579 2970 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFXAPO00287 AL391684.1-202ENST00000641293 1636 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 RNU6-552P-201ENST00000362869 119 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 Y_RNA.176-201ENST00000363815 109 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 Y_RNA.257-201ENST00000364596 102 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 Y_RNA.378-201ENST00000365652 113 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC117470.1-201ENST00000381974 330 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 RNU6-310P-201ENST00000384655 107 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 ARF4P3-201ENST00000397387 509 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 UBE2V1P2-201ENST00000397758 440 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 EIF5P1-201ENST00000400019 1231 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AL031679.1-201ENST00000400616 525 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 CTSL3P-202ENST00000412179 788 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 RPL7P10-201ENST00000417407 739 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AL139095.3-201ENST00000419672 1203 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 SKA2P1-201ENST00000425592 390 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 COX6CP15-201ENST00000426313 211 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.8□□□□□ -1.64
RFXAPO00287 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 RPL23AP15-201ENST00000450202 459 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 AC104308.1-201ENST00000454621 333 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC053481.1-201ENST00000467217 306 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms