Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.77□□□□□ -1.81
CGB1A6NKQ9 OR14L1P-202ENST00000641545 3009 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC109780.1-201ENST00000451768 1344 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AP001350.1-201ENST00000601906 1524 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 XIAPP3-201ENST00000312918 795 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 SNORA22B-201ENST00000383876 138 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 SNORD96B-201ENST00000386148 79 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RNU1-82P-201ENST00000390851 165 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 U3.20-201ENST00000390909 217 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 MIR1178-201ENST00000408396 91 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RN7SKP125-201ENST00000410481 302 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 DPPA2P3-201ENST00000411853 655 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC114755.2-201ENST00000413520 361 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 ARL5AP1-201ENST00000418991 388 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 PSMA6P3-201ENST00000428242 164 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AL590233.1-201ENST00000430017 456 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 TIMM9P1-201ENST00000436122 256 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AURKAPS2-201ENST00000454983 333 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 snoU13.20-201ENST00000459180 104 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RPS4XP10-201ENST00000465034 731 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RPL23AP11-201ENST00000475260 469 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 RPSAP50-201ENST00000481955 852 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC091868.1-201ENST00000508746 304 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC004062.1-201ENST00000509926 645 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 NARSP2-201ENST00000518524 679 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC011979.2-201ENST00000527568 352 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC018630.1-201ENST00000541376 925 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC008033.2-201ENST00000542626 177 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC133555.2-201ENST00000550213 292 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AL163153.1-201ENST00000554223 283 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC060771.1-201ENST00000582031 164 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AL512782.1-201ENST00000603093 364 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AL022099.1-201ENST00000604551 712 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 HMGN2P28-201ENST00000606102 262 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC091905.4-201ENST00000623432 202 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 MAPK10-320ENST00000641462 6696 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 AC011460.1-201ENST00000636268 1834 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 IRF5P1-201ENST00000504852 2164 ntBASIC3.76□□□□□ -1.81
CGB1A6NKQ9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CGB1A6NKQ9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.75□□□□□ -1.81
CGB1A6NKQ9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.75□□□□□ -1.81
CGB1A6NKQ9 AC012618.3-205ENST00000637896 1496 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU6-97P-201ENST00000363387 104 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU5E-8P-201ENST00000363502 116 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU6-263P-201ENST00000363811 107 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU6-335P-201ENST00000364563 113 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 Y_RNA.301-201ENST00000364990 103 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU6-38P-201ENST00000384085 107 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU6-1105P-201ENST00000384774 107 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 MTCYBP4-201ENST00000401524 249 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 AL606923.1-201ENST00000406616 190 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 AL583834.1-201ENST00000406943 343 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 RNU2-15P-201ENST00000410692 191 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 OR2AM1P-201ENST00000422137 422 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.75□□□□□ -1.81
CGB1A6NKQ9 AL358176.2-201ENST00000425769 204 ntBASIC3.75□□□□□ -1.81
CGB1A6NKQ9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms