Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 EXOC5P1-201ENST00000510543 1969 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC073343.1-201ENST00000328239 651 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RNU6-960P-201ENST00000364056 120 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 MT-TL1-201ENST00000386347 75 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RNU6-882P-201ENST00000391025 103 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AL359634.1-202ENST00000404721 284 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RPS3AP24-201ENST00000407896 734 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RNU2-36P-201ENST00000410361 191 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 UBE2FP1-201ENST00000416536 447 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RNU7-63P-201ENST00000459054 62 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 GMFBP1-201ENST00000467831 427 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RNU1-95P-201ENST00000516357 160 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RNU1-128P-201ENST00000516704 160 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AF235103.2-201ENST00000525753 346 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC123904.3-201ENST00000547218 814 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC005255.1-201ENST00000593748 216 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC010680.3-201ENST00000604215 520 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC012443.1-201ENST00000605605 231 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AL357078.3-201ENST00000607528 618 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 MIR6500-201ENST00000622700 86 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AC055839.1-201ENST00000634467 498 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 CASC19-280ENST00000642102 1351 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 NEAT1-202ENST00000501122 22743 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 AP001642.1-201ENST00000624727 2117 ntBASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CCDC85CA6NKD9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 TAB3P1-202ENST00000452645 1634 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 SNORA72.1-201ENST00000363485 129 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 RNU6-335P-201ENST00000364563 113 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 MIR128-1-201ENST00000384921 82 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 U3.26-201ENST00000391236 204 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AL354719.1-201ENST00000406535 843 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 RNU2-39P-201ENST00000410604 198 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 RPL21P24-201ENST00000413752 448 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 SSXP9-201ENST00000417503 292 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 MTATP6P16-201ENST00000434543 526 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 MTND5P20-201ENST00000448677 143 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 BX510359.1-201ENST00000456973 237 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 RPS27AP17-201ENST00000463344 455 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 RN7SKP57-201ENST00000517248 293 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 HMGB1P41-201ENST00000520234 440 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AP001646.1-201ENST00000527936 915 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 DEFB109D-201ENST00000529497 240 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC120057.2-201ENST00000571520 271 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AL161729.3-201ENST00000603533 673 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AL035413.2-201ENST00000604801 525 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AL049634.3-201ENST00000604968 457 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 DISC2.1-201ENST00000612827 205 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AL354798.1-201ENST00000622505 329 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 MIR3651-201ENST00000630427 90 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 MIR3662-201ENST00000637030 95 ntBASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC85CA6NKD9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AL139276.1-201ENST00000311910 1001 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 SNORA5A-201ENST00000384111 134 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 SNORD3H-201ENST00000384486 214 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms