Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL645937.1-201ENST00000641739 1652 ntBASIC3.78□□□□□ -1.81
TCRBV7S3A2A0A539 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
TCRBV7S3A2A0A539 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC007656.2-201ENST00000624902 4547 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 OR4G2P-201ENST00000328113 903 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-1155P-201ENST00000363554 107 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RNU5A-8P-201ENST00000364102 114 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-1279P-201ENST00000383917 103 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 MIR181A1-201ENST00000385026 110 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RPL7P60-201ENST00000397636 735 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 HMGN1P24-201ENST00000412282 298 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RAC1P3-201ENST00000416129 580 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 HMGB3P20-201ENST00000417997 600 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 OR1AA1P-201ENST00000419597 916 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 EIF1P1-201ENST00000421436 341 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC244098.2-201ENST00000422068 99 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AL139247.1-201ENST00000422768 325 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 ISCA1P1-201ENST00000426679 387 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC104850.1-201ENST00000435940 476 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 TIMM9P1-201ENST00000436122 256 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 USP9YP15-201ENST00000442391 422 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RPL21P89-201ENST00000444021 467 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 RPS29P31-201ENST00000446147 164 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC114755.5-201ENST00000447760 831 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AL136380.1-201ENST00000447970 162 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC010587.1-201ENST00000505809 469 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 Vault.3-201ENST00000516676 95 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 MTND4LP26-201ENST00000518144 282 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC103783.1-201ENST00000520506 373 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC124947.2-202ENST00000552735 133 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 OR4T1P-201ENST00000554933 911 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AP001429.1-201ENST00000602568 530 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AL606490.9-201ENST00000603331 271 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 U6atac.1-201ENST00000616025 117 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 uc_338.12-201ENST00000616344 181 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AL732618.1-201ENST00000623251 301 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC012020.1-201ENST00000624541 1728 ntBASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TCRBV7S3A2A0A539 AC010733.2-201ENST00000589496 5702 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 MIR423-201ENST00000362201 94 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 Y_RNA.296-201ENST00000364930 108 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-754P-201ENST00000391166 107 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 RPL30P2-201ENST00000414021 291 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 TPT1P14-201ENST00000448018 505 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 PSPHP1-201ENST00000450062 261 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 RPS3AP50-201ENST00000487064 803 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AP003072.2-201ENST00000527756 676 ntBASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.76□□□□□ -1.81
TCRBV7S3A2A0A539 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms