Protein–RNA interactions for Protein: Q9Y5W8

SNX13, Sorting nexin-13, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13Q9Y5W8 SUB1P2-201ENST00000556401 297 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 AC091042.1-201ENST00000579213 173 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 HMGB1P50-201ENST00000605814 607 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 AC007684.1-201ENST00000609671 477 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 AL021997.2-201ENST00000615674 271 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 AC090510.2-201ENST00000617465 629 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 SNORA11.6-201ENST00000619030 128 ntBASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX13Q9Y5W8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 SPTLC1P2-201ENST00000407089 121 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 MIR1179-201ENST00000408703 91 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 FCF1P9-201ENST00000412546 282 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 UBE2V1P10-201ENST00000414685 269 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 UQCRBP1-201ENST00000421129 336 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 MED13P1-201ENST00000428342 171 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 RPL23AP30-201ENST00000432419 501 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC002486.1-201ENST00000435098 391 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 MTATP6P30-201ENST00000443540 664 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC079781.2-201ENST00000446424 169 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 RPS3AP41-201ENST00000462701 778 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AL592156.1-201ENST00000508758 304 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC105914.1-201ENST00000511798 226 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 RNU6-390P-201ENST00000516259 103 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 SNORA70.16-201ENST00000516390 95 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 RNA5SP468-201ENST00000516782 93 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 RNU6-410P-201ENST00000517006 107 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 HMGB1P41-201ENST00000520234 440 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC007424.1-203ENST00000554613 687 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 RPL21P12-201ENST00000559810 515 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AP001029.3-201ENST00000588063 596 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC079587.1-201ENST00000603846 277 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AF250324.2-201ENST00000608299 610 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AL359880.1-201ENST00000621879 266 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 FRG1KP-201ENST00000623592 341 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 AC009161.2-201ENST00000624626 138 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
SNX13Q9Y5W8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SNX13Q9Y5W8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 GABPAP-201ENST00000419271 1356 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 RNU6-74P-201ENST00000384235 107 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 RNU6-456P-201ENST00000384493 107 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 MIR181A1-201ENST00000385026 110 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 MIR514A1-201ENST00000385133 98 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 RNA5SP332-201ENST00000391063 115 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 MTCO3P40-201ENST00000392516 676 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 RPL17P50-201ENST00000396131 546 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 MIR1183-201ENST00000408856 89 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AL807761.1-201ENST00000417622 171 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AC069157.1-201ENST00000421749 137 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 HMGB3P12-201ENST00000438745 556 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AC020550.1-201ENST00000447385 163 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AC093899.1-201ENST00000457984 376 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AC126182.1-201ENST00000478134 357 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AC069499.1-201ENST00000489433 509 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AL359273.1-201ENST00000510918 627 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 RNU6-1092P-201ENST00000516955 87 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 NRON-201ENST00000517270 370 ntBASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.02□□□□□ -1.77
SNX13Q9Y5W8 AP001893.2-201ENST00000526949 202 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms