Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 MIR3653-201ENST00000625572 110 ntBASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 MTND5P19-201ENST00000424872 1794 ntBASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 AC009313.2-201ENST00000417893 1941 ntBASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 NXPH1-205ENST00000602349 1953 ntBASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RTCBQ9Y3I0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 Y_RNA.148-201ENST00000363557 117 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 RNA5SP366-201ENST00000365454 123 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 MT-TR-201ENST00000387439 65 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 RNU6-985P-201ENST00000410182 104 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 RPS12P24-201ENST00000412619 387 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AL031736.2-201ENST00000426573 787 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 RPL23AP43-201ENST00000446445 471 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AL162395.1-201ENST00000457882 422 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AL139099.1-201ENST00000497398 403 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC017037.2-201ENST00000513850 890 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 RNU6-976P-201ENST00000516086 111 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 MIR4680-201ENST00000580906 66 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC083806.3-201ENST00000614016 455 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AL157817.1-201ENST00000614264 790 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AP001486.3-201ENST00000615334 372 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC074140.1-201ENST00000621617 208 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 AC022418.1-201ENST00000624118 445 ntBASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RTCBQ9Y3I0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNU6-1252P-201ENST00000363054 104 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNU6-179P-201ENST00000363350 107 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 Y_RNA.193-201ENST00000363979 102 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RN7SKP280-201ENST00000364196 304 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNU1-13P-201ENST00000384499 162 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AL359643.1-201ENST00000404109 423 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 MIR548F4-201ENST00000408515 105 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNA5SP317-201ENST00000410176 116 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNA5SP311-201ENST00000411290 116 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AL590609.2-201ENST00000421430 368 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AL731563.1-201ENST00000442202 214 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 Z95327.1-201ENST00000446082 482 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 PHBP16-201ENST00000446318 950 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AC073073.1-201ENST00000493920 463 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RPS27P27-201ENST00000498779 255 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 TRBVA-201ENST00000498804 316 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 CCDC34P1-201ENST00000507441 517 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNA5SP315-201ENST00000516340 116 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RNA5SP312-201ENST00000517068 116 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AC090136.1-201ENST00000520009 240 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 RN7SL176P-201ENST00000580352 264 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AF038458.1-201ENST00000588406 262 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 AC011155.2-201ENST00000623202 216 ntBASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RTCBQ9Y3I0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL136164.3-201ENST00000624429 3978 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms