Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 RN7SKP103-201ENST00000363848 320 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 RNU6-541P-201ENST00000384709 110 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 RNU6-1001P-201ENST00000411265 100 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 SDHDP6-201ENST00000414693 480 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AIMP1P2-201ENST00000425294 312 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AL450023.1-201ENST00000450868 751 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC026254.2-201ENST00000475295 371 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 HIGD1AP3-201ENST00000515857 278 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 RNU6-927P-201ENST00000516199 100 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 Y_RNA.677-201ENST00000516401 85 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 RNU6-537P-201ENST00000517277 103 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 MIR4701-201ENST00000583094 63 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC069294.1-201ENST00000608397 350 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AP001264.1-201ENST00000620602 703 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 AC073869.8-201ENST00000641806 335 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 LCOR-201ENST00000286067 4542 ntBASIC6.12□□□□□ -1.43
LHX6Q9UPM6 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LHX6Q9UPM6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 SNORA38B-201ENST00000363524 131 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 RNA5SP234-201ENST00000363916 119 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AL035079.1-201ENST00000405210 287 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 MIR1204-201ENST00000408388 67 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AL158156.1-201ENST00000422509 473 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC016712.1-201ENST00000431088 378 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AP000281.1-201ENST00000444036 316 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AL034399.1-201ENST00000451535 380 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 Y_RNA.651-201ENST00000459380 103 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 RPS4XP23-201ENST00000487801 237 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC114781.3-201ENST00000512083 142 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 IGKV2D-36-201ENST00000518643 226 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 NACAP3-201ENST00000552100 481 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 MIR3646-201ENST00000578301 84 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC010463.3-201ENST00000594077 500 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC107294.1-201ENST00000609524 467 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 RACGAP1P-201ENST00000550663 1879 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 AC009541.1-201ENST00000438279 2662 ntBASIC6.11□□□□□ -1.43
LHX6Q9UPM6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.11□□□□□ -1.43
LHX6Q9UPM6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 AC007993.1-201ENST00000621298 2430 ntBASIC6.1□□□□□ -1.43
LHX6Q9UPM6 AC110597.1-201ENST00000562669 3176 ntBASIC6.1□□□□□ -1.43
LHX6Q9UPM6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 AC105749.1-201ENST00000631338 2008 ntBASIC6.1□□□□□ -1.43
LHX6Q9UPM6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.1□□□□□ -1.43
LHX6Q9UPM6 SNORA70.3-201ENST00000365075 132 ntBASIC6.1□□□□□ -1.43
LHX6Q9UPM6 Y_RNA.388-201ENST00000383919 113 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms