Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC079804.1-201ENST00000461922 436 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC007537.2-201ENST00000472093 511 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 RPL21P103-201ENST00000479921 488 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC007686.1-201ENST00000488511 463 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC103851.1-201ENST00000506833 274 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-277P-201ENST00000516272 106 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 SCARNA15.1-201ENST00000516384 125 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CDH12P4-201ENST00000517835 295 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CDH12P3-201ENST00000517935 295 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CDH12P1-201ENST00000518435 295 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC100870.1-201ENST00000522035 505 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AP005435.4-201ENST00000529514 284 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AP003385.6-201ENST00000531603 374 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AL355375.2-201ENST00000574825 175 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AP001029.3-201ENST00000588063 596 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AP001429.1-201ENST00000602568 530 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC021646.1-201ENST00000605469 484 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AL031666.3-201ENST00000609320 1006 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 RMST_7.1-201ENST00000621935 268 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 AC140113.4-201ENST00000622087 222 ntBASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PPARGC1AQ9UBK2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-552P-201ENST00000362869 119 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 MIR192-201ENST00000384915 110 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RPL32P23-201ENST00000397237 405 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RPS16P5-201ENST00000406501 404 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 SNORA11B-201ENST00000408175 129 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 OR6C66P-201ENST00000414917 930 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC005094.1-201ENST00000440420 368 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AL162591.2-201ENST00000449634 317 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-329P-201ENST00000459618 107 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-1153P-201ENST00000516760 105 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RN7SKP256-201ENST00000517201 314 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 IGKV2D-36-201ENST00000518643 226 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 BTF3P12-201ENST00000519620 469 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 HMGB1P41-201ENST00000520234 440 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 SUMO2P20-201ENST00000520803 283 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AL133271.1-201ENST00000538229 291 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 NCAPGP2-201ENST00000557911 754 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 MIR4742-201ENST00000581069 85 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC006254.3-201ENST00000603353 884 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 PART1_1.1-201ENST00000611761 217 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC005858.4-201ENST00000623191 700 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC040168.1-201ENST00000623594 991 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 MTCO1P9-201ENST00000505577 1534 ntBASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PPARGC1AQ9UBK2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 AC015813.6-201ENST00000624409 5808 ntBASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 AC021146.4-201ENST00000309229 279 ntBASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 RNU1-20P-201ENST00000363314 162 ntBASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PPARGC1AQ9UBK2 RNU6-356P-201ENST00000384140 107 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms