Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC114797.1-201ENST00000514003 728 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC104057.1-201ENST00000515547 497 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 PTP4A1P6-201ENST00000531034 478 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 OR4K8P-201ENST00000578842 1048 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 MIR4458-201ENST00000578872 75 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC113403.1-201ENST00000604910 193 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RNU6-89P-201ENST00000606519 100 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC020634.1-201ENST00000608701 549 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 OR6R2P-201ENST00000609216 300 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC040896.1-201ENST00000613819 479 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC131238.1-201ENST00000617135 328 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC008121.3-201ENST00000618726 433 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AC009318.4-201ENST00000620496 486 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL133216.2-202ENST00000634512 349 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL596275.2-204ENST00000641628 552 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 AL596275.2-206ENST00000641957 626 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 LINC01109-201ENST00000603837 3081 ntBASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM7Q9NR12 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 SNORA71.3-201ENST00000362582 128 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.128-201ENST00000363391 112 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU5E-8P-201ENST00000363502 116 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU6-1243P-201ENST00000364028 107 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.216-201ENST00000364205 93 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.367-201ENST00000365544 101 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU4-20P-201ENST00000365601 151 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU6-43P-201ENST00000384302 107 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU6-39P-201ENST00000384344 107 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 MIR559-201ENST00000385188 96 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 U3.20-201ENST00000390909 217 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AL583835.1-201ENST00000399570 407 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU2-21P-201ENST00000410368 188 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AL451054.2-201ENST00000420896 202 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 ERLEC1P1-201ENST00000433806 578 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RPL7P52-201ENST00000449200 742 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 NANOGP10-201ENST00000453325 895 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 snoU13.8-201ENST00000458890 104 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU4-29P-201ENST00000515943 174 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 RNU6-1170P-201ENST00000515974 106 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 SNORD27.1-201ENST00000516319 72 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 SUMO2P20-201ENST00000520803 283 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 KC877982.1-201ENST00000602313 470 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 uc_338.12-201ENST00000616344 181 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 MIR8059-201ENST00000620427 81 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 BMS1P21-201ENST00000634565 365 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AC090229.1-201ENST00000590983 1609 ntBASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM7Q9NR12 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PDLIM7Q9NR12 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PDLIM7Q9NR12 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 AC011460.1-201ENST00000636268 1834 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 OR1S2-201ENST00000302592 978 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 AC073343.1-201ENST00000328239 651 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 RNY3P13-201ENST00000365542 102 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 SNORA4.3-201ENST00000365564 137 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 RNU6-474P-201ENST00000384243 107 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 AC009237.10-201ENST00000414112 510 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 AL356095.1-201ENST00000417217 199 ntBASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM7Q9NR12 PSMA6P3-201ENST00000428242 164 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms