Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 API5P2-201ENST00000397055 1498 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 ZNF29P-201ENST00000225587 168 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 SNORD116.1-201ENST00000365628 92 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 SNORA54-201ENST00000384281 123 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 DHFRP6-201ENST00000401776 268 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 CYCSP45-201ENST00000402289 315 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 MTCO2P8-201ENST00000412213 658 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 NANOGP5-201ENST00000424456 877 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC007742.1-201ENST00000425789 329 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC092648.1-201ENST00000425870 423 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 USP9YP11-201ENST00000427537 717 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL590233.1-201ENST00000430017 456 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 ELOCP26-201ENST00000436067 329 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL645638.1-201ENST00000440519 361 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC025750.2-201ENST00000442609 450 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 COX7A2P2-201ENST00000505291 250 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 RPL23AP94-201ENST00000512518 302 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AP002404.1-201ENST00000532005 451 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC080013.4-201ENST00000607624 649 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL355810.1-201ENST00000614629 552 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC022960.3-201ENST00000619794 441 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AL353748.2-201ENST00000622148 471 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
HPS4Q9NQG7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HPS4Q9NQG7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 OR5BR1P-201ENST00000524992 1330 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC106754.1-201ENST00000562632 1513 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 RNU2-47P-201ENST00000410649 186 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC019178.2-201ENST00000423595 505 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 USP9YP36-201ENST00000424581 829 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 USP9YP24-201ENST00000434374 697 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC107083.1-201ENST00000439643 279 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 USP9YP17-201ENST00000444617 696 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 Z82190.1-201ENST00000454534 490 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC114981.1-201ENST00000503897 678 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC111000.2-201ENST00000507775 550 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 KLHL2P1-201ENST00000508691 521 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 RNY4P37-201ENST00000516225 96 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 SETP7-201ENST00000552169 453 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AL391156.1-201ENST00000554965 554 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 MIR4298-201ENST00000584380 73 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 DUXAP3-201ENST00000603616 594 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC026790.2-201ENST00000606282 430 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC106052.1-201ENST00000608029 497 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC107075.1-201ENST00000613695 314 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 uc_338.25-201ENST00000613756 156 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AL356585.4-201ENST00000623078 1229 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AC005858.4-201ENST00000623191 700 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 OR4G3P-201ENST00000633500 913 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 AL137790.1-201ENST00000634283 177 ntBASIC3.26□□□□□ -1.89
HPS4Q9NQG7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HPS4Q9NQG7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 MTND5P7-201ENST00000413558 1798 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 U3.11-201ENST00000364476 212 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 SNORA14A-201ENST00000364773 135 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms