Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC009313.2-201ENST00000417893 1941 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC023421.1-201ENST00000590535 1785 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 Z95327.2-201ENST00000414579 1873 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC112198.2-201ENST00000426589 6996 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-1159P-201ENST00000362933 107 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNA5SP234-201ENST00000363916 119 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNA5SP132-201ENST00000364725 118 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-338P-201ENST00000383888 105 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-842P-201ENST00000384269 107 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 SNORA16.2-201ENST00000390991 127 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 SNORD70.1-201ENST00000391007 85 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AP000580.1-201ENST00000404439 358 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNU2-14P-201ENST00000411053 191 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RPL21P112-201ENST00000434403 463 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AL359672.1-201ENST00000442302 409 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC243772.1-201ENST00000451620 410 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 PCMTD1P1-201ENST00000455560 355 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC018638.3-201ENST00000461273 132 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 NIP7P2-201ENST00000485801 544 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC093852.1-201ENST00000503587 266 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC083829.1-201ENST00000503756 657 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.703-201ENST00000516846 111 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-570P-201ENST00000517051 105 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AL121576.1-201ENST00000556055 276 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC104763.2-201ENST00000604179 382 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC012443.1-201ENST00000605605 231 ntBASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NUCKS1Q9H1E3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 ADAM5-202ENST00000399789 1942 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.19-201ENST00000362462 99 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 SNORD27-201ENST00000363981 72 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-280P-201ENST00000364145 104 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.399-201ENST00000383955 105 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.416-201ENST00000384014 113 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.551-201ENST00000384661 102 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 MIR143-201ENST00000385300 106 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC097374.1-203ENST00000400783 485 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 OR3A2-201ENST00000408891 1076 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RN7SKP229-201ENST00000410465 302 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RPL21P109-201ENST00000422213 475 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AL353597.2-202ENST00000434901 373 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC087879.1-201ENST00000474343 374 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RN7SL814P-201ENST00000487715 300 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RN7SL184P-201ENST00000488308 297 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC093767.1-201ENST00000504523 156 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RBBP4P6-201ENST00000508098 202 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-323P-201ENST00000521915 107 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AL049839.1-201ENST00000556151 657 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AL133153.1-201ENST00000557756 303 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC022884.2-201ENST00000578535 580 ntBASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUCKS1Q9H1E3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms