Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC108099.1-201ENST00000564402 3258 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC007114.2-201ENST00000576014 4281 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC131649.2-201ENST00000624925 4439 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC007938.1-201ENST00000562524 2902 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC006116.1-201ENST00000587908 2171 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AL445933.1-201ENST00000434240 2242 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AP006437.1-201ENST00000641440 3685 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR133A2-201ENST00000347538 102 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR425-201ENST00000362162 87 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-78P-201ENST00000362897 107 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.206-201ENST00000364136 102 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP10-201ENST00000364291 325 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORD32A-201ENST00000364805 84 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORD115-26-201ENST00000365067 82 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC093392.1-201ENST00000366280 340 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA2B-201ENST00000384583 137 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR301A-201ENST00000385261 86 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC013442.1-201ENST00000397347 228 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR873-201ENST00000401120 77 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SNRPEP6-201ENST00000407465 277 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR320B2-201ENST00000408479 138 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP152-201ENST00000410444 315 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP136-201ENST00000410927 300 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 CFL1P7-201ENST00000424759 486 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AL365496.1-201ENST00000426885 215 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AL627311.1-201ENST00000431514 115 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RPS27P18-201ENST00000431701 247 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC004006.1-201ENST00000434994 377 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 OR5S1P-201ENST00000453063 951 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR1270-201ENST00000459320 83 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU7-80P-201ENST00000459562 61 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 PPIAP21-201ENST00000464473 501 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL160P-201ENST00000468558 284 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL807P-201ENST00000470923 297 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RPS10P16-201ENST00000483812 496 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC018695.1-201ENST00000484096 664 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL434P-201ENST00000495872 271 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 RACK1-211ENST00000504726 388 ntTSL 5 BASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 VWA8P1-201ENST00000510889 176 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 SNRPCP8-201ENST00000514820 211 ntBASIC1.54□□□□□ -2.16
KRTAP4-4Q9BYR3 AC093878.1-201ENST00000515630 432 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms