Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RPL35AP12-201ENST00000425362 338 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 RPL21P2-201ENST00000440049 481 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC002542.1-201ENST00000440683 193 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 Z73417.1-201ENST00000447373 778 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 MTND1P31-201ENST00000449206 961 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC233982.1-201ENST00000451247 436 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 BX248409.1-201ENST00000455497 255 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 USP9YP25-201ENST00000457708 443 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 HMGB1P22-201ENST00000505315 124 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC023632.1-201ENST00000518463 375 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 HMGB1P1-201ENST00000522557 636 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC010306.1-201ENST00000523223 1117 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 MTND3P12-201ENST00000559068 328 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC009097.3-201ENST00000563557 1018 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 DUXAP4-201ENST00000603046 613 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC002487.1-201ENST00000604565 994 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC131902.3-201ENST00000611767 581 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AL592148.2-201ENST00000612210 372 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 AC018926.3-201ENST00000618841 406 ntBASIC2.54□□□□□ -2
RSPO3Q9BXY4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RSPO3Q9BXY4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
RSPO3Q9BXY4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.54□□□□□ -2
RSPO3Q9BXY4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RSPO3Q9BXY4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.53□□□□□ -2
RSPO3Q9BXY4 FTLP6-201ENST00000355274 422 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 RNU6-50P-201ENST00000362356 103 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 snoZ40.1-201ENST00000364540 72 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 RNU6-619P-201ENST00000365146 108 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 ERHP2-201ENST00000402323 299 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 ATG3P1-201ENST00000419507 911 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 MTCYBP24-201ENST00000420387 1106 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC109583.1-201ENST00000432156 268 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AL591719.1-201ENST00000444669 744 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC008481.1-201ENST00000463278 396 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.53□□□□□ -2
RSPO3Q9BXY4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.53□□□□□ -2
RSPO3Q9BXY4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC010486.1-201ENST00000511793 424 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC008562.1-201ENST00000521763 330 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 COX6B1P6-201ENST00000522347 255 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AP004371.1-201ENST00000525240 214 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 MTCO2P15-201ENST00000532655 656 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC023538.1-201ENST00000534576 736 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC022080.3-201ENST00000544433 482 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 MIR5708-201ENST00000579723 85 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 MIR4666A-201ENST00000580160 79 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC023043.3-201ENST00000593113 385 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 CLIC4P2-201ENST00000601934 717 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC091057.2-201ENST00000602594 792 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC013470.4-201ENST00000619978 986 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 AC090897.3-201ENST00000636973 1157 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 MFSD8-245ENST00000641743 948 ntBASIC2.53□□□□□ -2
RSPO3Q9BXY4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RSPO3Q9BXY4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
RSPO3Q9BXY4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms