Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 MIR3934-201ENST00000579806 107 ntBASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AC024619.4-201ENST00000580924 316 ntBASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AC244100.1-202ENST00000621554 382 ntBASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
YIPF4Q9BSR8 AC000123.3-201ENST00000624029 4975 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 MAPK10-263ENST00000641052 4307 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 SNORA73.1-201ENST00000363107 205 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 Y_RNA.128-201ENST00000363391 112 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 Y_RNA.378-201ENST00000365652 113 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNU6-641P-201ENST00000384006 107 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 MIR135A2-201ENST00000384854 100 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL606923.1-201ENST00000406616 190 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RPL5P18-201ENST00000406671 891 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNU2-62P-201ENST00000410868 191 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNU6-1304P-201ENST00000411374 106 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 GJA6P-201ENST00000415117 1042 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RPL23AP38-201ENST00000423801 469 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNU7-182P-201ENST00000459009 62 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL591473.1-201ENST00000464297 313 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC012181.1-201ENST00000479895 423 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC027575.1-201ENST00000481064 460 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC083904.1-201ENST00000487828 231 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNU6-864P-201ENST00000516256 108 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNU6-1088P-201ENST00000516850 104 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RN7SKP260-201ENST00000516907 149 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 Y_RNA.711-201ENST00000516993 102 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AP000857.1-201ENST00000532151 543 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC005868.1-201ENST00000536421 331 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC005255.1-201ENST00000593748 216 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL670379.11-201ENST00000604059 253 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL670379.10-201ENST00000604330 253 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL670379.12-201ENST00000605291 253 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL670379.9-201ENST00000605428 253 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC124303.1-201ENST00000605703 360 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AL121655.1-201ENST00000605811 308 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC093838.1-201ENST00000613014 469 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 uc_338.15-201ENST00000615470 191 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 AC084781.2-201ENST00000615568 161 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 MIR4275-201ENST00000636486 87 ntBASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF4Q9BSR8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.65□□□□□ -1.66
YIPF4Q9BSR8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.65□□□□□ -1.66
YIPF4Q9BSR8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
YIPF4Q9BSR8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.65□□□□□ -1.66
YIPF4Q9BSR8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.65□□□□□ -1.66
YIPF4Q9BSR8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
YIPF4Q9BSR8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
YIPF4Q9BSR8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
YIPF4Q9BSR8 SNURFL-201ENST00000309296 343 ntBASIC4.65□□□□□ -1.67
YIPF4Q9BSR8 RNA5SP235-201ENST00000365411 114 ntBASIC4.65□□□□□ -1.67
YIPF4Q9BSR8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
YIPF4Q9BSR8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms