Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC073869.6-201ENST00000640656 341 ntBASIC4.01□□□□□ -1.77
PAAF1Q9BRP4 MTND5P26-201ENST00000426018 1752 ntBASIC4.01□□□□□ -1.77
PAAF1Q9BRP4 LINC01109-201ENST00000603837 3081 ntBASIC4.01□□□□□ -1.77
PAAF1Q9BRP4 AC068254.2-201ENST00000623938 3577 ntBASIC4.01□□□□□ -1.77
PAAF1Q9BRP4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 Y_RNA.6-201ENST00000362350 114 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 Y_RNA.516-201ENST00000384541 124 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 MIR7-3-201ENST00000384898 110 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 RNU6-278P-201ENST00000390945 109 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 RPS7P15-201ENST00000415804 584 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 USP9YP36-201ENST00000424581 829 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL121871.1-201ENST00000443413 436 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 NDUFAF4P4-201ENST00000454883 502 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC105252.1-201ENST00000503089 286 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 HMGN1P28-201ENST00000521340 364 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 DEFB108A-201ENST00000530110 222 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC008011.1-201ENST00000545989 227 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC087883.1-201ENST00000551882 391 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC090616.5-202ENST00000582111 297 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC012669.1-201ENST00000603209 283 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC006254.3-201ENST00000603353 884 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL137849.1-201ENST00000604767 169 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL391261.4-201ENST00000616012 481 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC012150.2-201ENST00000621300 544 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AL357559.1-201ENST00000622228 274 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC068880.5-201ENST00000624331 290 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 SEPT14P19-203ENST00000633205 211 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 AC027290.2-201ENST00000623210 18662 ntBASIC4□□□□□ -1.77
PAAF1Q9BRP4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
PAAF1Q9BRP4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAAF1Q9BRP4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC007823.1-201ENST00000569932 1566 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RNU6-517P-201ENST00000384362 110 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 MIR183-201ENST00000384958 110 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AL583834.1-201ENST00000406943 343 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RNU6-516P-201ENST00000411381 104 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 FCF1P9-201ENST00000412546 282 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RPS15AP12-201ENST00000419498 388 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 BEND7P1-201ENST00000422058 457 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 C8orf59P1-201ENST00000429930 303 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 FCF1P1-201ENST00000432690 571 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RPS3AP46-201ENST00000448352 682 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC010655.1-201ENST00000449336 292 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC010493.1-201ENST00000513479 292 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 RN7SKP18-201ENST00000516005 275 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 DEFB109D-201ENST00000529497 240 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AL133271.1-201ENST00000538229 291 ntBASIC3.99□□□□□ -1.77
PAAF1Q9BRP4 AL121603.1-201ENST00000553815 142 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms