Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.92
SSX3Q99909 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSX3Q99909 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.09□□□□□ -1.92
SSX3Q99909 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.09□□□□□ -1.92
SSX3Q99909 AL391994.1-201ENST00000254724 282 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX3Q99909 RNU6-853P-201ENST00000364306 107 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 RNU6-1078P-201ENST00000364522 103 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX3Q99909 RNU6-1027P-201ENST00000383998 107 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SSX3Q99909 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SSX3Q99909 TAS2R15P-201ENST00000390674 928 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 RNU6-1197P-201ENST00000391183 107 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX3Q99909 AL591503.2-201ENST00000442314 1005 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.08□□□□□ -1.92
SSX3Q99909 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX3Q99909 AC112653.1-201ENST00000443851 386 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX3Q99909 AL133547.1-201ENST00000448546 220 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 MRPS31P2-201ENST00000451581 518 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC007967.1-201ENST00000455422 1159 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC034222.1-201ENST00000494052 532 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC106872.3-201ENST00000495104 446 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 KCTD9P5-201ENST00000504141 1170 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX3Q99909 SLC25A15P5-201ENST00000508033 253 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 HMGN1P11-201ENST00000508668 303 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 TRMT10BP1-201ENST00000519377 943 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 SUMO2P20-201ENST00000520803 283 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 NDUFB9P3-201ENST00000521269 501 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AP003497.1-201ENST00000528472 562 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSX3Q99909 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX3Q99909 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX3Q99909 OR7K1P-201ENST00000546439 926 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC009094.1-201ENST00000564443 426 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX3Q99909 AC087499.8-201ENST00000578406 226 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 MIR4429-201ENST00000580105 73 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX3Q99909 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX3Q99909 GLUD1P4-201ENST00000590914 418 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 NUTF2P8-201ENST00000604593 363 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX3Q99909 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AL138880.2-201ENST00000616214 239 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 AC091905.1-201ENST00000624400 311 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX3Q99909 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SSX3Q99909 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SSX3Q99909 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
SSX3Q99909 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX3Q99909 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.07□□□□□ -1.92
SSX3Q99909 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSX3Q99909 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX3Q99909 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSX3Q99909 RNU6-433P-201ENST00000363216 104 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RNU6-799P-201ENST00000363567 107 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RNU6-114P-201ENST00000384704 105 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 MIR199A2-201ENST00000385289 110 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL590084.2-201ENST00000401481 382 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL391417.1-201ENST00000404100 426 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.07□□□□□ -1.92
SSX3Q99909 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 UBE2FP3-201ENST00000436366 524 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 Z74696.2-201ENST00000436514 498 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC108734.1-201ENST00000439549 399 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.07□□□□□ -1.92
SSX3Q99909 SETD6P1-201ENST00000444575 317 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 MTCYBP3-201ENST00000445588 1137 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AP000542.1-201ENST00000448473 371 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RPS17P13-201ENST00000448974 407 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 UBDP1-202ENST00000457888 382 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC091564.1-201ENST00000464563 479 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 LINC00888-204ENST00000487386 421 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 POU5F1P7-201ENST00000508759 541 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 RNU6-798P-201ENST00000516912 103 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 Y_RNA.717-201ENST00000517106 92 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC125611.2-201ENST00000551907 647 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSX3Q99909 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC002400.1-201ENST00000569310 726 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.07□□□□□ -1.92
SSX3Q99909 ISCA1P3-201ENST00000577104 373 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 MIR3921-201ENST00000577308 85 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms