Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 RNU6-114P-201ENST00000384704 105 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 RPS3AP24-201ENST00000407896 734 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC007390.1-201ENST00000415722 356 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AL445669.1-201ENST00000426743 755 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AL512649.1-201ENST00000428997 581 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 ATP5JP1-201ENST00000431631 322 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 OR4K11P-201ENST00000431829 904 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC024082.2-201ENST00000434771 238 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.36□□□□□ -1.87
CPNE1Q99829 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 RPF2P2-201ENST00000504693 896 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.36□□□□□ -1.87
CPNE1Q99829 FCF1P8-201ENST00000510322 597 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.36□□□□□ -1.87
CPNE1Q99829 RN7SKP21-201ENST00000516503 220 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 HIGD1AP10-201ENST00000527837 282 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 SYF2P1-201ENST00000550658 413 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AC012435.1-202ENST00000568772 240 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.36□□□□□ -1.87
CPNE1Q99829 BDH2P1-201ENST00000602288 736 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC068313.1-201ENST00000604028 1008 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CPNE1Q99829 BCRP9-201ENST00000605312 388 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC127502.3-201ENST00000636170 1206 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC006927.3-201ENST00000638789 384 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 AC006378.2-201ENST00000623178 2476 ntBASIC3.36□□□□□ -1.87
CPNE1Q99829 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CPNE1Q99829 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC009902.3-201ENST00000606235 2172 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CPNE1Q99829 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.35□□□□□ -1.87
CPNE1Q99829 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CPNE1Q99829 RNA5SP197-201ENST00000363357 119 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 SNORD56.3-201ENST00000363507 71 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 RNU6-553P-201ENST00000364047 96 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
CPNE1Q99829 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.35□□□□□ -1.87
CPNE1Q99829 RNU4-65P-201ENST00000410473 140 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 TPMTP3-201ENST00000411928 735 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.35□□□□□ -1.87
CPNE1Q99829 RPL23AP22-201ENST00000437556 453 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 THAP5P1-201ENST00000439089 262 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 FAM103A2P-201ENST00000444122 354 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 Z99127.3-201ENST00000448158 395 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 RBMY2UP-201ENST00000453474 324 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.35□□□□□ -1.87
CPNE1Q99829 OR2A20P-203ENST00000498397 1268 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 RN7SKP13-201ENST00000515933 244 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 GTF2IP22-201ENST00000554443 182 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AL391156.1-201ENST00000554965 554 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC090888.1-201ENST00000561335 1141 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AC015917.1-201ENST00000579654 510 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AP001029.3-201ENST00000588063 596 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.35□□□□□ -1.87
CPNE1Q99829 VN1R85P-201ENST00000601587 426 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 MTCYBP22-201ENST00000603788 447 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.35□□□□□ -1.87
CPNE1Q99829 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AL450472.3-201ENST00000615578 367 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 MIR7844-201ENST00000616161 122 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AL356321.1-201ENST00000621360 228 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC009268.2-201ENST00000621925 457 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC244258.1-201ENST00000637553 1071 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CPNE1Q99829 AL513185.3-201ENST00000433335 1300 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 AC011460.1-201ENST00000636268 1834 ntBASIC3.35□□□□□ -1.87
CPNE1Q99829 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CPNE1Q99829 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CPNE1Q99829 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms