Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PKP4Q99569 PRO1804-201ENST00000623780 2050 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.68□□□□□ -1.82
PKP4Q99569 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 RNU5A-6P-201ENST00000384136 116 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 Y_RNA.582-201ENST00000391023 95 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 U3.29-201ENST00000391296 212 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PKP4Q99569 MIR548F1-201ENST00000408667 84 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 HMGN1P14-201ENST00000412459 517 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC009237.5-201ENST00000414271 501 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 RPL7P2-201ENST00000427639 268 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 AL139415.2-201ENST00000431968 163 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.68□□□□□ -1.82
PKP4Q99569 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.68□□□□□ -1.82
PKP4Q99569 DNAJC19P4-201ENST00000440115 345 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.68□□□□□ -1.82
PKP4Q99569 AL136097.1-201ENST00000456945 913 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.68□□□□□ -1.82
PKP4Q99569 RN7SL132P-201ENST00000478131 296 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC004924.1-201ENST00000480160 781 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC023424.2-201ENST00000493479 777 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC021678.1-201ENST00000505195 936 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC006499.2-201ENST00000513470 337 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 MTND5P4-201ENST00000514978 288 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC093853.1-201ENST00000515689 483 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 RNA5SP164-201ENST00000516533 110 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 RNU6-506P-201ENST00000516553 94 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 RNA5SP468-201ENST00000516782 93 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 RN7SKP289-201ENST00000517244 295 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 NRON-201ENST00000517270 370 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC008127.2-201ENST00000549925 1075 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 SYF2P1-201ENST00000550658 413 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 HSPE1P5-201ENST00000561489 272 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 TPRKBP2-201ENST00000565969 475 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.68□□□□□ -1.82
PKP4Q99569 MIR5685-201ENST00000579080 79 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.68□□□□□ -1.82
PKP4Q99569 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC020914.4-201ENST00000597690 277 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC112187.2-201ENST00000604345 283 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL022154.1-201ENST00000604698 785 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AC109347.2-201ENST00000610220 349 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL391261.4-201ENST00000616012 481 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC091905.1-201ENST00000624400 311 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL603839.4-201ENST00000624658 1005 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.68□□□□□ -1.82
PKP4Q99569 AC091152.2-201ENST00000591628 2569 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 MTND5P26-201ENST00000426018 1752 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PKP4Q99569 AC006504.1-201ENST00000562493 3666 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 AL049780.3-201ENST00000624612 1583 ntBASIC3.68□□□□□ -1.82
PKP4Q99569 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKP4Q99569 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKP4Q99569 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKP4Q99569 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.67□□□□□ -1.82
PKP4Q99569 RNA5SP295-201ENST00000362655 121 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 Y_RNA.248-201ENST00000364501 109 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKP4Q99569 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PKP4Q99569 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PKP4Q99569 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKP4Q99569 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AC007390.1-201ENST00000415722 356 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.67□□□□□ -1.82
PKP4Q99569 MTND3P21-201ENST00000433774 331 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 RPL37P21-201ENST00000435890 276 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 SETP5-201ENST00000437270 562 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 RBMX2P4-201ENST00000441256 376 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 NANOGNBP1-201ENST00000448444 480 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AL033528.1-201ENST00000453780 140 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.67□□□□□ -1.82
PKP4Q99569 KLF3P2-201ENST00000465138 268 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 RN7SL330P-201ENST00000469709 307 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.67□□□□□ -1.82
PKP4Q99569 LARP1BP2-201ENST00000486594 519 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AL358832.1-201ENST00000497800 389 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.67□□□□□ -1.82
PKP4Q99569 BTF3L4P4-201ENST00000506381 449 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PKP4Q99569 AC026412.2-201ENST00000512270 1075 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 NPM1P41-201ENST00000512920 831 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 RNU6-150P-201ENST00000516237 95 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 PAICSP4-201ENST00000517543 1253 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.67□□□□□ -1.82
PKP4Q99569 AP002748.2-201ENST00000528671 348 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AC068587.4-201ENST00000533893 186 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 MTCO3P24-201ENST00000572729 782 ntBASIC3.67□□□□□ -1.82
PKP4Q99569 AC141257.3-201ENST00000572906 215 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms