Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 SYF2P1-201ENST00000550658 413 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC012414.6-201ENST00000568241 401 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 KLKP1-201ENST00000595979 403 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC106900.2-201ENST00000604994 317 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC008277.2-201ENST00000605196 797 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC080013.6-201ENST00000606185 215 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 uc_338.13-201ENST00000618243 179 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC048344.4-201ENST00000619744 527 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL445363.3-201ENST00000623080 671 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AL079305.1-201ENST00000623159 3008 ntBASIC3.64□□□□□ -1.83
NR1H4Q96RI1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NR1H4Q96RI1 AC021755.1-201ENST00000559747 1447 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AP002088.1-201ENST00000382740 395 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 SNORA40.3-201ENST00000390964 122 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RPS16P5-201ENST00000406501 404 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RNU2-8P-201ENST00000410727 190 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 ELOCP17-201ENST00000414751 326 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RPL17P36-201ENST00000420302 549 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RPEP3-201ENST00000425462 676 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL356867.1-201ENST00000429623 299 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL158071.1-201ENST00000430315 461 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 TIMM9P1-201ENST00000436122 256 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 MTND4P32-201ENST00000437189 1237 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC006011.1-201ENST00000442758 349 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RPL17P49-201ENST00000443728 411 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL360221.1-201ENST00000445989 335 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 MTND1P27-201ENST00000451117 902 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 SSXP1-201ENST00000453640 473 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RPS27P29-201ENST00000463110 252 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC008481.1-201ENST00000463278 396 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 MTND4LP3-201ENST00000468320 276 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 ACTR3P3-201ENST00000480448 893 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC109464.2-201ENST00000510242 943 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 FTH1P21-201ENST00000512179 511 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RPL21P5-201ENST00000554662 472 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 MIR3146-201ENST00000580367 79 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 MIR3682-201ENST00000581338 84 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC005771.1-201ENST00000585581 349 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 BX664608.1-201ENST00000610519 487 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL049539.1-201ENST00000611964 459 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AC092140.2-201ENST00000618027 521 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
NR1H4Q96RI1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.63□□□□□ -1.83
NR1H4Q96RI1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 SNORA73.2-201ENST00000364946 201 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 RPL21P24-201ENST00000413752 448 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AC018630.2-202ENST00000422992 927 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AL590383.1-201ENST00000428602 75 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 BX679664.1-201ENST00000434429 253 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 MTCO3P45-201ENST00000443036 613 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AP000936.2-201ENST00000447151 681 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AL049714.1-201ENST00000466686 347 ntBASIC3.62□□□□□ -1.83
NR1H4Q96RI1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H4Q96RI1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms