Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 COX6CP8-201ENST00000522620 226 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC011260.1-201ENST00000578420 472 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 MIR3944-201ENST00000581277 108 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 ELOCP29-201ENST00000588193 334 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC025016.1-201ENST00000616746 682 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 MIR1291-201ENST00000627649 87 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL356118.1-201ENST00000635272 1078 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 U6.107-201ENST00000637108 79 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL022578.1-201ENST00000439330 1433 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 RNA5SP138-201ENST00000365098 114 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AL445529.1-201ENST00000398713 389 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AL359511.1-201ENST00000402970 211 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 RNU6-920P-201ENST00000410926 92 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 LINC01347-201ENST00000417964 355 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC091390.3-201ENST00000426478 338 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 FCF1P1-201ENST00000432690 571 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 GPM6BP3-201ENST00000442797 145 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 RPS15AP27-201ENST00000449183 343 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC104435.1-201ENST00000483483 166 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC079804.2-201ENST00000490376 200 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 MIR4429-201ENST00000580105 73 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 MIR4448-201ENST00000584360 86 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC017100.2-201ENST00000584628 355 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC025594.3-201ENST00000613068 790 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC073968.1-201ENST00000618594 637 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.71□□□□□ -2.14
AP1S3Q96PC3 OR8B1P-202ENST00000641132 1178 ntBASIC1.71□□□□□ -2.14
AP1S3Q96PC3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 HMGB3P31-201ENST00000413333 595 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 KRR1P1-201ENST00000419430 803 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC098614.2-201ENST00000426040 255 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 RPL7L1P10-201ENST00000427790 463 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 OSTCP8-201ENST00000445117 448 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC090453.1-201ENST00000495560 436 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 KATNBL1P4-201ENST00000503545 918 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 FABP5P6-201ENST00000510588 409 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 RNA5SP320-201ENST00000516263 124 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 SNORA31.18-201ENST00000517043 134 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC078814.3-201ENST00000553036 491 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AL138976.2-201ENST00000563989 694 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 MIR4444-1-201ENST00000581696 74 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC090312.2-201ENST00000582687 378 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 MIR5195-201ENST00000583555 115 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 MIR4444-2-201ENST00000584390 74 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 ATP1B3P1-201ENST00000605365 821 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC018926.3-201ENST00000618841 406 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
AP1S3Q96PC3 MTCO1P6-201ENST00000481192 1384 ntBASIC1.7□□□□□ -2.14
AP1S3Q96PC3 AC104446.1-201ENST00000613728 1321 ntBASIC1.69□□□□□ -2.14
AP1S3Q96PC3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.69□□□□□ -2.14
AP1S3Q96PC3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
AP1S3Q96PC3 HMGB1P5-201ENST00000255320 642 ntBASIC1.69□□□□□ -2.14
AP1S3Q96PC3 RN7SKP226-201ENST00000364912 300 ntBASIC1.69□□□□□ -2.14
AP1S3Q96PC3 MIR17-201ENST00000385012 84 ntBASIC1.69□□□□□ -2.14
AP1S3Q96PC3 MIR34A-201ENST00000385130 110 ntBASIC1.69□□□□□ -2.14
AP1S3Q96PC3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms