Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS3Q969F9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HPS3Q969F9 RLIMP1-201ENST00000339626 1680 ntBASIC4.45□□□□□ -1.7
HPS3Q969F9 AC004925.1-201ENST00000624256 2706 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.44□□□□□ -1.7
HPS3Q969F9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.44□□□□□ -1.7
HPS3Q969F9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HPS3Q969F9 MAPK10-372ENST00000641954 3413 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HPS3Q969F9 RNU5E-1-201ENST00000362477 120 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RNA5SP399-201ENST00000364003 117 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RNU6-754P-201ENST00000391166 107 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HPS3Q969F9 RNU4-6P-201ENST00000410804 122 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 UBE2V1P10-201ENST00000414685 269 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 EI24P1-201ENST00000416584 867 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AL356095.1-201ENST00000417217 199 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RPL31P35-201ENST00000431058 377 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AL358934.1-201ENST00000432346 324 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 FCF1P1-201ENST00000432690 571 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC104850.1-201ENST00000435940 476 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC007967.1-201ENST00000455422 1159 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AL359385.1-201ENST00000456509 365 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RPL38P1-201ENST00000460914 211 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RPL7P19-201ENST00000469948 618 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RPS3AP50-201ENST00000487064 803 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 RPL9P6-201ENST00000492764 598 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 FTH1P21-201ENST00000512179 511 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC026402.1-201ENST00000513642 170 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS3Q969F9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.44□□□□□ -1.7
HPS3Q969F9 AC087883.1-201ENST00000551882 391 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS3Q969F9 ZNF519P2-201ENST00000557032 169 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS3Q969F9 AP001094.1-201ENST00000579805 193 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC107304.1-201ENST00000604229 296 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AC092794.1-201ENST00000612734 582 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 uc_338.12-201ENST00000616344 181 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AL603758.1-201ENST00000618654 241 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 AL158209.2-201ENST00000619266 216 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS3Q969F9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.44□□□□□ -1.7
HPS3Q969F9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS3Q969F9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS3Q969F9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 RNA5SP235-201ENST00000365411 114 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS3Q969F9 SNORA20.2-201ENST00000383922 131 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 MIR135A2-201ENST00000384854 100 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RNA5SP317-201ENST00000410176 116 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RNA5SP311-201ENST00000411290 116 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 ELOCP4-201ENST00000420090 333 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS3Q969F9 ISCA1P1-201ENST00000426679 387 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AC011742.1-201ENST00000431448 434 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS3Q969F9 MTND1P4-201ENST00000435196 415 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AC114755.5-201ENST00000447760 831 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AC108078.1-201ENST00000508073 725 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RNA5SP315-201ENST00000516340 116 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RNA5SP312-201ENST00000517068 116 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS3Q969F9 OR5G4P-201ENST00000525251 760 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS3Q969F9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AL845331.3-202ENST00000562856 261 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AL109618.2-201ENST00000605527 211 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS3Q969F9 AC093838.1-201ENST00000613014 469 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 U6atac.1-201ENST00000616025 117 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 AC019226.1-201ENST00000625666 515 ntBASIC4.43□□□□□ -1.7
HPS3Q969F9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HPS3Q969F9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS3Q969F9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HPS3Q969F9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 MIR372-201ENST00000362225 67 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 RNY3P13-201ENST00000365542 102 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS3Q969F9 RNU2-43P-201ENST00000410306 190 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 RNU4-65P-201ENST00000410473 140 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
HPS3Q969F9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms