Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM41Q8WV44 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM41Q8WV44 PAPPA-AS1-201ENST00000445861 2450 ntBASIC8.56□□□□□ -1.04
TRIM41Q8WV44 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM41Q8WV44 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM41Q8WV44 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM41Q8WV44 AC004158.1-201ENST00000564508 4319 ntBASIC8.56□□□□□ -1.04
TRIM41Q8WV44 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 SNORA66-201ENST00000384792 133 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 RNU6-33P-201ENST00000384793 107 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 MIR491-201ENST00000384877 84 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 PTMAP2-201ENST00000397627 327 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AL136372.1-201ENST00000403060 228 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 SNORA77-201ENST00000408716 125 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AL354766.1-201ENST00000423396 542 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 CEP57L1P1-201ENST00000430943 1201 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AC092013.1-201ENST00000438795 332 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 SCARNA18-201ENST00000459004 134 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 RPL7P49-201ENST00000471402 708 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AC023157.2-201ENST00000540596 141 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 MIR3128-201ENST00000581957 66 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AL355810.1-201ENST00000614629 552 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 AC103705.1-201ENST00000619013 241 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 CR392039.4-201ENST00000624968 501 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 RNA5SP196-201ENST00000625967 102 ntBASIC8.55□□□□□ -1.04
TRIM41Q8WV44 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TRIM41Q8WV44 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 RNU6-511P-201ENST00000363496 107 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 RNU4-46P-201ENST00000410818 138 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC017078.1-201ENST00000416146 368 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 OR4C10P-201ENST00000434991 931 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 RPL21P2-201ENST00000440049 481 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AL354714.3-201ENST00000447284 493 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 CEACAMP6-201ENST00000452007 574 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 HMGB3P21-201ENST00000452483 547 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC093767.1-201ENST00000504523 156 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 RN7SL690P-201ENST00000582087 240 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 IGHV3-29-201ENST00000604817 344 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 ANAPC1P1-201ENST00000426186 2145 ntBASIC8.54□□□□□ -1.04
TRIM41Q8WV44 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM41Q8WV44 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 RNU6-188P-201ENST00000364207 107 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 SNORA24.1-201ENST00000384401 135 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 MIR129-1-201ENST00000384972 72 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 COX6CP15-201ENST00000426313 211 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 YME1L1P1-201ENST00000429435 297 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 HSFY6P-201ENST00000445573 403 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AC079168.2-201ENST00000453977 416 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AP001992.1-205ENST00000462248 379 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AL136126.1-201ENST00000473603 402 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 SNRPCP3-201ENST00000474888 476 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 SCARNA16.2-201ENST00000516520 172 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 FAM60DP-201ENST00000524174 632 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM41Q8WV44 RRN3P3-201ENST00000549207 578 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AC125232.2-201ENST00000592457 143 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AC008739.3-201ENST00000603262 127 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AL136313.1-201ENST00000624804 202 ntBASIC8.53□□□□□ -1.04
TRIM41Q8WV44 AC055839.1-201ENST00000634467 498 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 371.6 ms