Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 UQCRHP3-201ENST00000451503 251 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 SNORD105B-201ENST00000458770 79 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 RPS3AP22-201ENST00000488297 769 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 NPM1P41-201ENST00000512920 831 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 MRPS33P3-201ENST00000513456 322 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 APOOP4-201ENST00000513530 597 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC034159.1-201ENST00000513885 583 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 RN7SKP13-201ENST00000515933 244 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 RN7SKP21-201ENST00000516503 220 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AP003497.1-201ENST00000528472 562 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC008015.1-201ENST00000555505 465 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 BNIP3P5-201ENST00000562290 498 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC007224.1-201ENST00000564410 144 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC055876.1-202ENST00000567053 138 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 SNORD84-203ENST00000584275 78 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AP001029.3-201ENST00000588063 596 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 ELOCP35-201ENST00000604289 336 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AL590099.1-201ENST00000615276 138 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AP000676.3-201ENST00000623299 569 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC019226.2-201ENST00000625973 424 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC084035.1-201ENST00000634543 607 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 API5P2-201ENST00000397055 1498 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AL353743.1-202ENST00000431724 1695 ntBASIC3.32□□□□□ -1.88
CCDC63Q8NA47 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC63Q8NA47 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 MTND5P7-201ENST00000413558 1798 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 FRG1BP-201ENST00000278882 761 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL672167.1-206ENST00000356293 943 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 RNU6-359P-201ENST00000365466 108 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL359837.1-201ENST00000381357 287 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 RNU6-1207P-201ENST00000384343 107 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC245054.2-201ENST00000415639 319 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL137014.1-201ENST00000420490 1226 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 MTCO1P39-201ENST00000426148 480 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 UBE2FP3-201ENST00000436366 524 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 Z99127.3-201ENST00000448158 395 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AP000542.1-201ENST00000448473 371 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 TPT1P12-201ENST00000448968 492 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 ART2BP-201ENST00000453501 499 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 SNORD121B-201ENST00000458838 81 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 snoU13.8-201ENST00000458890 104 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 RPL21P8-201ENST00000465083 535 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC104563.1-201ENST00000476147 376 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 MTND3P12-201ENST00000559068 328 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL031176.1-201ENST00000604554 466 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC097468.3-201ENST00000607956 456 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL390240.1-201ENST00000612950 384 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL110115.1-201ENST00000614396 364 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AL355810.1-201ENST00000614629 552 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC091304.6-201ENST00000619761 202 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 SNORD39.4-201ENST00000620099 78 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC002550.2-201ENST00000621246 394 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 AC079416.3-201ENST00000624479 549 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 CRYM-AS1-204ENST00000637983 556 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
CCDC63Q8NA47 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC63Q8NA47 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms