Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 OR6C73P-201ENST00000546432 358 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC004853.1-201ENST00000604902 698 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AC243312.2-201ENST00000623340 601 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 AL732372.2-225ENST00000642124 456 ntBASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH20Q8N6Y1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC092104.1-201ENST00000497346 1441 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 SNORA71.3-201ENST00000362582 128 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RNY4P24-201ENST00000362735 96 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RNU6-853P-201ENST00000364306 107 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RNU6-809P-201ENST00000384461 107 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 MIR218-2-201ENST00000385006 110 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RNU4-78P-201ENST00000410940 126 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC245052.5-201ENST00000416320 649 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AL589823.1-201ENST00000429577 183 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC091862.1-201ENST00000438016 1100 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC092641.1-201ENST00000440229 772 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RPL21P23-201ENST00000446654 460 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AL358232.1-201ENST00000448030 501 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 SNRPFP4-201ENST00000456366 242 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC006390.1-201ENST00000508068 283 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AF131216.2-201ENST00000512316 564 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RN7SKP13-201ENST00000515933 244 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 RNU6-714P-201ENST00000516963 103 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 MTND4LP18-201ENST00000526864 291 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 OR4P1P-201ENST00000530808 1136 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 MIR5697-201ENST00000578045 78 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 MIR3611-201ENST00000584484 83 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 BNIP3P33-201ENST00000598912 569 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC006077.1-201ENST00000604746 343 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AL365503.1-201ENST00000605247 905 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC012557.2-201ENST00000605919 418 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC091965.4-201ENST00000607691 587 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 MFSD8-236ENST00000641509 4050 ntBASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH20Q8N6Y1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL365440.1-201ENST00000436135 2167 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 Y_RNA.559-201ENST00000384686 107 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL353691.1-201ENST00000451332 387 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 SSXP1-201ENST00000453640 473 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 CFTRP1-201ENST00000456646 183 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 MTCO1P42-201ENST00000457379 726 ntBASIC3.63□□□□□ -1.83
PCDH20Q8N6Y1 HMGB1P25-201ENST00000468402 607 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms