Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AC104058.1-201ENST00000448028 297 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 HMGB1P15-201ENST00000453854 435 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 RNU7-180P-201ENST00000459240 63 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 SNORA59A-201ENST00000459326 152 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AL049714.1-201ENST00000466686 347 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AC092436.1-201ENST00000506450 503 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AC007016.1-201ENST00000512110 244 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AP000857.1-201ENST00000532151 543 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AL118558.2-201ENST00000556294 238 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 MTCO3P23-201ENST00000561363 289 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 MIR4775-201ENST00000581168 75 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AF038458.1-201ENST00000588406 262 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 HSPE1P14-201ENST00000605812 302 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AC113194.1-201ENST00000606037 500 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 RAD17P1-201ENST00000418130 2042 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 Z95331.1-201ENST00000623075 23112 ntBASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TMEFF1Q8IYR6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 AC025031.4-201ENST00000621248 3271 ntBASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 AC010300.1-201ENST00000600671 5134 ntBASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TMEFF1Q8IYR6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 RNY3P13-201ENST00000365542 102 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 DEFB109C-201ENST00000382575 264 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 DEFB109B-201ENST00000382656 264 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 MIR558-201ENST00000384920 94 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 MIR634-201ENST00000385208 97 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 SSXP10-201ENST00000402595 565 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 MED13P1-201ENST00000428342 171 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC096644.2-201ENST00000429278 159 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 RPL36P19-201ENST00000430744 301 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 MTATP6P16-201ENST00000434543 526 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 MIR2053-201ENST00000459295 91 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 RN7SL558P-201ENST00000497468 299 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 Y_RNA.654-201ENST00000497848 106 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 RPS27P27-201ENST00000498779 255 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 RNA5SP454-201ENST00000517231 127 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC011979.2-201ENST00000527568 352 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC128657.1-201ENST00000549459 145 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 LSM3P2-201ENST00000551246 273 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC040958.1-201ENST00000561102 201 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 BNIP3P25-201ENST00000596023 559 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC073539.2-201ENST00000597113 165 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 uc_338.11-201ENST00000619132 160 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AL162373.1-201ENST00000620433 407 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AL731566.1-201ENST00000620490 1937 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 TAB3P1-202ENST00000452645 1634 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC097714.1-201ENST00000511272 1647 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 AC032011.1-201ENST00000611703 1549 ntBASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TMEFF1Q8IYR6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 AC011460.1-201ENST00000636268 1834 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 RNU6-1115P-201ENST00000362490 106 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 Y_RNA.167-201ENST00000363735 109 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 RNU6-379P-201ENST00000363813 104 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 SNORD46.1-201ENST00000364139 104 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 Y_RNA.212-201ENST00000364177 102 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 SNORA62.1-201ENST00000364287 154 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 SNORA71.2-201ENST00000364941 134 ntBASIC4.7□□□□□ -1.66
TMEFF1Q8IYR6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms