Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP440-201ENST00000612665 119 ntBASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SCUBE3Q8IX30 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RNU4-90P-201ENST00000362773 141 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RNU6-937P-201ENST00000384325 106 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 MIR578-201ENST00000384828 96 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RNA5SP91-201ENST00000390902 119 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RNU6-817P-201ENST00000391083 104 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 MIR190B-201ENST00000401119 79 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RPL31P2-201ENST00000413849 377 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RPL23AP36-201ENST00000413895 458 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 CYCSP33-201ENST00000414485 327 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC087650.1-201ENST00000431445 468 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC022431.1-201ENST00000450941 438 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RPL12P39-201ENST00000455456 496 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 snoU109.4-201ENST00000458953 143 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 FTH1P24-201ENST00000503502 462 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 SNORA70.20-201ENST00000516848 126 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 MIR2355-201ENST00000517199 87 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC018442.3-201ENST00000523025 183 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 PRPF19P1-201ENST00000584766 898 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RN7SL544P-201ENST00000617232 284 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RN7SL763P-201ENST00000620922 284 ntBASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SCUBE3Q8IX30 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 PROS2P-201ENST00000474651 1951 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 MIR375-201ENST00000362103 64 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 SNORD20-201ENST00000384550 80 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 RNU6-918P-201ENST00000391219 106 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 HSPE1P8-201ENST00000406997 288 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 RPS3AP2-201ENST00000407190 754 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AL445665.1-202ENST00000452436 324 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AL590705.4-201ENST00000532209 134 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 NF1P5-201ENST00000588287 448 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 SUMO2P15-201ENST00000604285 278 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC011921.3-201ENST00000605540 361 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 RN7SL787P-201ENST00000613000 284 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC240442.1-201ENST00000616055 283 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 AC239868.2-201ENST00000564237 4527 ntBASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
SCUBE3Q8IX30 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.03□□□□□ -1.44
SCUBE3Q8IX30 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SCUBE3Q8IX30 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.03□□□□□ -1.44
SCUBE3Q8IX30 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCUBE3Q8IX30 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
SCUBE3Q8IX30 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.03□□□□□ -1.44
SCUBE3Q8IX30 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms