Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AL390240.1-201ENST00000612950 384 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 uc_338.18-201ENST00000615451 175 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC084781.2-201ENST00000615568 161 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AP000346.3-201ENST00000622821 210 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MTND4P14-201ENST00000435799 1354 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AL445437.1-201ENST00000623157 3087 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC011155.1-201ENST00000316512 456 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC019155.1-201ENST00000382242 574 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-43P-201ENST00000384302 107 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.625-201ENST00000411256 107 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 UBE2FP1-201ENST00000416536 447 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC140479.3-201ENST00000418944 1126 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 SOCS5P3-201ENST00000425115 1576 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 PSMA2P3-201ENST00000429685 675 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 RPL12P46-201ENST00000436610 195 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC020550.1-201ENST00000447385 163 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC010655.1-201ENST00000449336 292 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC005008.1-201ENST00000456151 612 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AP000942.1-201ENST00000463969 747 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC002456.2-201ENST00000509356 380 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.682-201ENST00000516457 100 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 HMGB1P19-201ENST00000517578 577 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MTND4P7-201ENST00000523876 130 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 CR383656.7-201ENST00000548164 174 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 CYCSP40-201ENST00000575927 294 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MIR4512-201ENST00000583257 77 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MIR3171-201ENST00000584270 74 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AL022099.1-201ENST00000604551 712 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AL627309.6-201ENST00000606857 840 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MIR8069-1-201ENST00000616627 86 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MIR8069-2-201ENST00000621412 86 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AL359757.2-201ENST00000624309 274 ntBASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM48Q8IWZ4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM48Q8IWZ4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
TRIM48Q8IWZ4 ZFRP1-201ENST00000457579 2970 ntBASIC4.59□□□□□ -1.68
TRIM48Q8IWZ4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM48Q8IWZ4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 BDP1P-201ENST00000582658 1990 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AL359922.3-201ENST00000624779 1670 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 MTCO1P9-201ENST00000505577 1534 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-61P-201ENST00000365528 109 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 Y_RNA.414-201ENST00000384011 101 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-637P-201ENST00000384050 107 ntBASIC4.58□□□□□ -1.68
TRIM48Q8IWZ4 RNU6-474P-201ENST00000384243 107 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms