Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USP48Q86UV5 RNU6-223P-201ENST00000362830 107 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 Y_RNA.279-201ENST00000364763 95 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RNU6-432P-201ENST00000384196 109 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 PPIAP31-201ENST00000405422 495 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 SNORA11F-201ENST00000408237 128 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RNA5SP44-201ENST00000410446 133 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RNU6-373P-201ENST00000411247 98 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC009237.10-201ENST00000414112 510 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC092447.6-201ENST00000414578 210 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 MTCO3P12-201ENST00000416718 547 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RPL23AP38-201ENST00000423801 469 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 MED13P1-201ENST00000428342 171 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 OR4K11P-201ENST00000431829 904 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.46□□□□□ -1.54
USP48Q86UV5 PMCHL2-203ENST00000457791 237 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RPS20P20-201ENST00000460498 340 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 PCBP2P3-201ENST00000509726 843 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 TMEM248P1-201ENST00000510579 951 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.46□□□□□ -1.54
USP48Q86UV5 RNA5SP401-201ENST00000515920 127 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RNU7-51P-201ENST00000516560 62 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 RNU1-45P-201ENST00000517191 141 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.46□□□□□ -1.54
USP48Q86UV5 OR5AL2P-201ENST00000532185 920 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.46□□□□□ -1.54
USP48Q86UV5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.46□□□□□ -1.54
USP48Q86UV5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.46□□□□□ -1.54
USP48Q86UV5 OR4K8P-201ENST00000578842 1048 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.46□□□□□ -1.54
USP48Q86UV5 AP001429.1-201ENST00000602568 530 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC006254.3-201ENST00000603353 884 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC135507.2-201ENST00000612443 309 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AL354950.2-201ENST00000617939 290 ntBASIC5.46□□□□□ -1.54
USP48Q86UV5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.46□□□□□ -1.54
USP48Q86UV5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP48Q86UV5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.46□□□□□ -1.54
USP48Q86UV5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USP48Q86UV5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
USP48Q86UV5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP48Q86UV5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP48Q86UV5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP48Q86UV5 Y_RNA.86-201ENST00000363020 111 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 Y_RNA.367-201ENST00000365544 101 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 RNU4-48P-201ENST00000365559 182 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 RNU6-637P-201ENST00000384050 107 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 MIR554-201ENST00000384874 96 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 MIR558-201ENST00000384920 94 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 RNA5SP372-201ENST00000390836 115 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 MIR921-201ENST00000401133 56 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 AL591416.1-201ENST00000404015 867 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 SNORA11.1-201ENST00000408133 129 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.45□□□□□ -1.54
USP48Q86UV5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.45□□□□□ -1.54
USP48Q86UV5 ATP5JP1-201ENST00000431631 322 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 CKS1BP5-201ENST00000434172 273 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 MRPS18BP2-201ENST00000434310 759 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AC234775.1-201ENST00000454247 670 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 RPL36AP13-201ENST00000457490 317 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 RPL21P103-201ENST00000479921 488 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.45□□□□□ -1.54
USP48Q86UV5 SNORD27.1-201ENST00000516319 72 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.45□□□□□ -1.54
USP48Q86UV5 OR5BN1P-201ENST00000532955 829 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AC128657.1-201ENST00000549459 145 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.45□□□□□ -1.54
USP48Q86UV5 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.45□□□□□ -1.54
USP48Q86UV5 AL603758.1-201ENST00000618654 241 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP48Q86UV5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
USP48Q86UV5 MFSD8-242ENST00000641690 4199 ntBASIC5.45□□□□□ -1.54
USP48Q86UV5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP48Q86UV5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
USP48Q86UV5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 Y_RNA.72-201ENST00000362894 103 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 RNU6-511P-201ENST00000363496 107 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 Y_RNA.157-201ENST00000363638 102 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 RNA5SP387-201ENST00000364226 106 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP48Q86UV5 RNU6-356P-201ENST00000384140 107 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AL354719.1-201ENST00000406535 843 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 RNU4-78P-201ENST00000410940 126 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 RNU6-1068P-201ENST00000410958 103 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC006020.1-201ENST00000420179 1854 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.44□□□□□ -1.54
USP48Q86UV5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms