Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 SETP2-201ENST00000553886 926 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC090888.2-201ENST00000559765 1144 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC009570.1-201ENST00000609599 745 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC009464.1-201ENST00000615731 469 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AC009268.2-201ENST00000621925 457 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AP000676.4-201ENST00000624659 623 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRPF39Q86UA1 AL021368.2-201ENST00000606125 5352 ntBASIC3.62□□□□□ -1.83
PRPF39Q86UA1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC008568.2-201ENST00000623862 2313 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC073346.2-201ENST00000624724 2058 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 RN7SKP266-201ENST00000410232 287 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 RNU6-516P-201ENST00000411381 104 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AL049874.1-201ENST00000489560 388 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 POU5F1P7-201ENST00000508759 541 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 RNU6-798P-201ENST00000516912 103 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC026333.2-201ENST00000542164 106 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC011602.1-201ENST00000546484 331 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC011260.1-201ENST00000578420 472 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AL161756.2-201ENST00000604597 246 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC024560.3-201ENST00000608482 349 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC079395.3-201ENST00000615161 484 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.61□□□□□ -1.83
PRPF39Q86UA1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.61□□□□□ -1.83
PRPF39Q86UA1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC012321.1-201ENST00000561622 1588 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 RPS4XP3-201ENST00000398541 413 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 MTND4P13-201ENST00000402078 1023 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 HMGB1P11-201ENST00000413899 637 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AP000907.1-201ENST00000428428 510 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 TXNP1-201ENST00000441872 371 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AL136097.1-201ENST00000456945 913 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 HMGN2P13-201ENST00000476476 274 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 RPL30P14-201ENST00000482744 348 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AL358832.1-201ENST00000497800 389 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 GMPSP1-201ENST00000514075 579 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC068587.4-201ENST00000533893 186 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 MIR4999-201ENST00000585029 91 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 BNIP3P38-201ENST00000601117 544 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC097468.3-201ENST00000607956 456 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC103710.4-201ENST00000609301 899 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AP000254.1-201ENST00000609934 520 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 MIR4275-201ENST00000636486 87 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC099063.3-201ENST00000642066 185 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AC104454.1-201ENST00000421341 1401 ntBASIC3.6□□□□□ -1.83
PRPF39Q86UA1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
PRPF39Q86UA1 AL049781.1-201ENST00000623195 3585 ntBASIC3.59□□□□□ -1.83
PRPF39Q86UA1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PRPF39Q86UA1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms