Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC009268.2-201ENST00000621925 457 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 CR392039.5-201ENST00000623201 510 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB1Q86U70 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB1Q86U70 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDB1Q86U70 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LDB1Q86U70 PABPC1P9-201ENST00000426076 1612 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDB1Q86U70 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB1Q86U70 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 SNORA73.2-201ENST00000364946 201 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 Z98941.1-201ENST00000407764 100 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 RPL30P2-201ENST00000414021 291 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC090960.1-201ENST00000421072 306 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AL390023.1-201ENST00000428836 262 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC018644.1-201ENST00000429934 551 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.48□□□□□ -1.85
LDB1Q86U70 CFTRP1-201ENST00000456646 183 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 U3.44-201ENST00000458938 192 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 RPL7P15-201ENST00000461190 712 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC109486.1-201ENST00000486833 374 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 VN1R104P-201ENST00000505115 1009 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC116347.2-201ENST00000514912 523 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 RN7SKP18-201ENST00000516005 275 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 Y_RNA.688-201ENST00000516565 95 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB1Q86U70 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB1Q86U70 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.48□□□□□ -1.85
LDB1Q86U70 MIR5047-201ENST00000579212 100 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 UBE2L4-201ENST00000587688 464 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC006116.10-201ENST00000591836 581 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 TPMTP1-201ENST00000592307 737 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB1Q86U70 AC090425.2-201ENST00000608818 501 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 U7.8-201ENST00000619968 63 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AL158801.5-201ENST00000623123 465 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AP003355.3-201ENST00000623465 114 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC244258.1-201ENST00000637553 1071 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC092125.1-201ENST00000562568 1995 ntBASIC3.48□□□□□ -1.85
LDB1Q86U70 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDB1Q86U70 MTND5P33-201ENST00000571250 1450 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB1Q86U70 AL513185.3-201ENST00000433335 1300 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB1Q86U70 AC009812.4-201ENST00000569134 1805 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB1Q86U70 RNU5F-6P-201ENST00000362979 116 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 RNU6-637P-201ENST00000384050 107 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB1Q86U70 RPS3AP24-201ENST00000407896 734 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 RN7SKP27-201ENST00000410684 333 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AC009237.5-201ENST00000414271 501 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC009518.2-201ENST00000418056 731 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB1Q86U70 GOT2P5-201ENST00000433995 546 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC024082.2-201ENST00000434771 238 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 CYCSP43-201ENST00000438233 310 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 BMI1P1-201ENST00000445879 941 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AL133547.1-201ENST00000448546 220 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB1Q86U70 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB1Q86U70 PCBP2P3-201ENST00000509726 843 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC026801.2-201ENST00000515352 425 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB1Q86U70 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.47□□□□□ -1.85
LDB1Q86U70 ZNF192P1-203ENST00000565888 810 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 MIR1254-2-201ENST00000579553 63 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 MIR3922-201ENST00000585192 84 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB1Q86U70 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AF131215.7-201ENST00000602443 707 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms