Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 U3.42-201ENST00000408746 214 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AC079809.1-201ENST00000415468 276 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 COX6CP10-201ENST00000416832 224 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AC010655.1-201ENST00000449336 292 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 RN7SL583P-201ENST00000475692 287 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 RPL31P60-201ENST00000478450 367 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AC122688.1-201ENST00000541494 223 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 MIR4643-201ENST00000577473 78 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 TUG1_2.1-201ENST00000614234 87 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AP000560.1-201ENST00000624150 1937 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AC093849.1-201ENST00000563631 2209 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 BCORP1-203ENST00000513194 5093 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 SNORD81.1-201ENST00000363064 77 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 SNORD115-46-201ENST00000390982 71 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AL391361.1-201ENST00000405580 489 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 EI24P4-201ENST00000423683 1078 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC006946.1-201ENST00000429106 328 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 OR6D1P-201ENST00000436165 939 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 SNORD125-201ENST00000459538 96 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 RPS23P5-201ENST00000495419 428 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC005798.1-201ENST00000513715 387 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 RNU6-346P-201ENST00000516288 111 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC069113.1-201ENST00000517763 267 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC024405.2-202ENST00000532731 184 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 MIR1273E-201ENST00000581165 102 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AL158827.2-201ENST00000602494 330 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AL691447.3-201ENST00000635020 330 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 AP000550.3-201ENST00000637734 379 ntBASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LYSMD3Q7Z3D4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 AL359893.1-201ENST00000447628 1580 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 LINC01963-201ENST00000562038 3148 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 Y_RNA.16-201ENST00000362421 102 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 RN7SKP185-201ENST00000362813 326 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 RNU4-44P-201ENST00000363050 141 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 RN7SKP160-201ENST00000363804 340 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 RNY1P5-201ENST00000383890 115 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 Y_RNA.458-201ENST00000384240 102 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 Y_RNA.533-201ENST00000384596 114 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 Y_RNA.592-201ENST00000410274 109 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 RNU4-65P-201ENST00000410473 140 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 AC007161.1-204ENST00000423039 460 ntBASIC5.56□□□□□ -1.52
LYSMD3Q7Z3D4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms