Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 RSL24D1P11-201ENST00000591045 491 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 IGHV3-29-201ENST00000604817 344 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC103710.4-201ENST00000609301 899 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC104010.1-201ENST00000616889 150 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 U73479.1-201ENST00000618062 168 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC009509.4-201ENST00000619202 509 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC009878.1-201ENST00000621819 340 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC039056.2-201ENST00000622261 511 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC025048.6-202ENST00000627667 438 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC009093.8-201ENST00000641769 292 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 Y_RNA.553-201ENST00000384670 102 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 RNU6-837P-201ENST00000391056 108 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 RN7SKP53-201ENST00000411337 315 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC007390.1-201ENST00000415722 356 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AL158071.1-201ENST00000430315 461 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 MTCO3P5-201ENST00000433620 714 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AL353706.1-201ENST00000436728 494 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 COX6CP12-201ENST00000446748 202 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 SNRPGP9-201ENST00000456025 225 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AP001025.2-201ENST00000490908 477 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 CBX3P3-201ENST00000508108 532 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 RPL12P22-201ENST00000519073 490 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC090616.5-202ENST00000582111 297 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 U73023.1-201ENST00000603134 700 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 PRELID3BP8-201ENST00000604148 295 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC068276.1-201ENST00000605793 379 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC087752.4-201ENST00000605911 462 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 AC092628.2-201ENST00000622492 339 ntBASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SYNE3Q6ZMZ3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 MIR218-2-201ENST00000385006 110 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 SNORD115.1-201ENST00000391109 76 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 RN7SKP142-201ENST00000411236 328 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC109780.2-201ENST00000413467 845 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 SYF2P2-201ENST00000417620 583 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AIMP1P1-201ENST00000418670 937 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 DBIP2-201ENST00000419076 262 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 CYCSP4-201ENST00000429682 331 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 GOT2P5-201ENST00000433995 546 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC073063.1-201ENST00000434352 607 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 MTND1P28-201ENST00000435623 950 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 MTCO2P7-201ENST00000446518 666 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 ST13P20-201ENST00000447996 1065 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 RPL7P52-201ENST00000449200 742 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 SNRPFP4-201ENST00000456366 242 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 BTF3P5-201ENST00000457252 467 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 SNORD121B-201ENST00000458838 81 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC078817.1-201ENST00000492623 435 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC022447.1-201ENST00000515358 464 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AP003497.1-201ENST00000528472 562 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC103843.2-201ENST00000530523 682 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AP004242.1-201ENST00000533701 349 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC026333.2-201ENST00000542164 106 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC006254.3-201ENST00000603353 884 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 RN7SKP299-201ENST00000606679 301 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC138749.5-201ENST00000611461 208 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC084782.3-201ENST00000612282 578 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 RNVU1-4-201ENST00000612985 164 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC116165.2-201ENST00000616705 206 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 XIST_intron.1-201ENST00000619444 68 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC012442.3-202ENST00000636742 206 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AL365440.1-201ENST00000436135 2167 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms