Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC011373.1-201ENST00000607270 237 ntBASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 AC097468.3-201ENST00000607956 456 ntBASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 AC078899.5-201ENST00000612475 178 ntBASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 PISRT1-201ENST00000626175 531 ntBASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 TPTEP1-208ENST00000636884 213 ntBASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 AC100810.6-201ENST00000638068 285 ntBASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYCE2Q6PIF2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC011266.1-201ENST00000624119 3569 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 Y_RNA.146-201ENST00000363549 102 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 RNU6-1066P-201ENST00000363573 105 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 Y_RNA.166-201ENST00000363730 102 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 RNU6-777P-201ENST00000364265 104 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 RNU6-1160P-201ENST00000384546 104 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MIR491-201ENST00000384877 84 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MIR34B-201ENST00000385076 84 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MIR548P-201ENST00000408336 84 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 Y_RNA.608-201ENST00000410647 95 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 RN7SKP167-201ENST00000411047 285 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC073335.1-201ENST00000427776 363 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AL358472.1-201ENST00000431295 329 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 CYCSP43-201ENST00000438233 310 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 Y_RNA.632-201ENST00000459189 102 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC012158.1-204ENST00000483430 465 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC021146.2-201ENST00000504736 556 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC010493.1-201ENST00000513479 292 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC112206.3-201ENST00000514578 389 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MTND5P4-201ENST00000514978 288 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 SNORA74D-201ENST00000516404 141 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 RNU7-30P-201ENST00000516835 62 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 DEFB131D-201ENST00000526803 184 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 ELOCP31-201ENST00000540463 467 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC068714.1-201ENST00000559623 800 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 HMGB3P26-201ENST00000560051 582 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AL845331.3-202ENST00000562856 261 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC093249.1-201ENST00000567049 203 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MIR3668-201ENST00000582138 75 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MIR544B-201ENST00000582372 78 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MIR4307-201ENST00000582802 84 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC008737.2-201ENST00000599446 118 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC007687.1-201ENST00000602704 304 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AL355802.3-201ENST00000607571 545 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 CASC19-284ENST00000642142 1868 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 AC066616.2-201ENST00000559334 1481 ntBASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCE2Q6PIF2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 AC007823.1-201ENST00000569932 1566 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 NOL8P1-201ENST00000508336 3529 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 RNU6-462P-201ENST00000362659 105 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 Y_RNA.184-201ENST00000363884 108 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 AL354719.1-201ENST00000406535 843 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 VN1R8P-201ENST00000407739 893 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 RNU6-1148P-201ENST00000410992 104 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 RNA5SP39-201ENST00000411245 120 ntBASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.23□□□□□ -1.73
SYCE2Q6PIF2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms