Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC093655.2-201ENST00000425735 631 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 RPL26P6-201ENST00000440913 438 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 snoU13.20-201ENST00000459180 104 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC008897.1-201ENST00000494006 347 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 RNU6-496P-201ENST00000516145 99 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 RNU6-914P-201ENST00000516749 109 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC109479.2-201ENST00000517842 174 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC008745.1-201ENST00000604064 271 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC073657.2-201ENST00000605661 303 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AC097372.5-201ENST00000623665 376 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AL596275.2-204ENST00000641628 552 ntBASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCRAQ6ISU1 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC138907.8-201ENST00000623981 2256 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RN7SKP104-201ENST00000362605 328 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RNU1-32P-201ENST00000363937 159 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RNU6-47P-201ENST00000383866 107 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 Y_RNA.602-201ENST00000410535 92 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC004938.1-201ENST00000438468 308 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 PRDX3P3-201ENST00000447765 522 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RPS11P1-201ENST00000451072 473 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RPS23P2-201ENST00000463671 415 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RPS27AP13-201ENST00000498403 237 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 RN7SKP288-201ENST00000516227 268 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 OR4H12P-201ENST00000556269 907 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC234771.5-201ENST00000600161 514 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AL606537.1-201ENST00000607258 2011 ntBASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.8□□□□□ -1.48
PTCRAQ6ISU1 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 RNU4-90P-201ENST00000362773 141 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 SNORA17.1-201ENST00000362945 126 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 RNVU1-6-201ENST00000364688 164 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 Y_RNA.292-201ENST00000364904 97 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 RNU6-821P-201ENST00000390995 107 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 RNU6-735P-201ENST00000410612 107 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 EI24P1-201ENST00000416584 867 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 AL096701.2-201ENST00000416920 238 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 USP9YP7-201ENST00000436723 430 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 AL031659.1-201ENST00000447075 539 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 USP9YP32-201ENST00000452432 430 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 RPS15AP34-201ENST00000487776 387 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 AC004980.4-201ENST00000513375 203 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 SNORA70.11-201ENST00000515987 138 ntBASIC5.79□□□□□ -1.48
PTCRAQ6ISU1 SNORA70.13-201ENST00000516116 138 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms