Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RC3H1Q5TC82 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AC009313.2-201ENST00000417893 1941 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 Y_RNA.81-201ENST00000362997 102 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 RNU6-1059P-201ENST00000363752 98 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 RNU6-729P-201ENST00000384399 107 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 MIR137-201ENST00000385223 102 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 RNU6-1140P-201ENST00000410517 106 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 MYL8P-204ENST00000431574 518 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AL133396.1-201ENST00000432048 687 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 RPL37P1-201ENST00000432310 284 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 RAC1P7-201ENST00000445367 377 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 RPL10P17-201ENST00000453852 316 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AC100784.1-201ENST00000522790 310 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AC090517.1-201ENST00000569307 266 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 MIR7853-201ENST00000584820 132 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AC010900.2-201ENST00000604508 210 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 AC074140.1-201ENST00000621617 208 ntBASIC6.37□□□□□ -1.39
RC3H1Q5TC82 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.37□□□□□ -1.39
RC3H1Q5TC82 CASC19-284ENST00000642142 1868 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC108751.5-201ENST00000492880 1336 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 SNORD58.1-201ENST00000391313 66 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 HMGN1P24-201ENST00000412282 298 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 RPL30P2-201ENST00000414021 291 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 RPLP0P7-201ENST00000416050 667 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC108032.1-201ENST00000416706 207 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 MRPS21P2-201ENST00000424704 264 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 TRBV26-201ENST00000456572 344 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 RNA5SP392-201ENST00000516905 112 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 RNU6-897P-201ENST00000517135 105 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC007991.1-201ENST00000522680 631 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 MIR4715-201ENST00000584117 79 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 RPL23AP92-201ENST00000603609 255 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 AL590392.1-201ENST00000604960 446 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 CYP3A51P-201ENST00000633513 256 ntBASIC6.36□□□□□ -1.39
RC3H1Q5TC82 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.36□□□□□ -1.39
RC3H1Q5TC82 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AC016745.2-201ENST00000608834 3443 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 RNU6-842P-201ENST00000384269 107 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 Y_RNA.526-201ENST00000384572 110 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 PRRC2CP1-201ENST00000404428 159 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 RNU6-387P-201ENST00000411331 105 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 EIF1P2-201ENST00000428233 350 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AL356981.1-201ENST00000454879 684 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AC005229.2-201ENST00000456995 399 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 SCARNA22-201ENST00000503991 125 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AC016559.2-201ENST00000510759 359 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 RNU6-397P-201ENST00000516226 104 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 RNU4-71P-201ENST00000516258 113 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AC026371.1-201ENST00000551867 419 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AL049794.2-201ENST00000616301 365 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 MIR6853-201ENST00000619642 74 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 MIR6839-201ENST00000620425 113 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AL360270.2-201ENST00000562952 5985 ntBASIC6.35□□□□□ -1.39
RC3H1Q5TC82 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RC3H1Q5TC82 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.34□□□□□ -1.39
RC3H1Q5TC82 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms