Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 Y_RNA.62-201ENST00000362840 99 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 WARS2P1-201ENST00000429678 537 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 RPS24P6-201ENST00000452670 400 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AC072039.1-201ENST00000477611 581 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AK6P1-201ENST00000540219 478 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AC016727.1-205ENST00000605437 569 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AP001521.1-201ENST00000609150 300 ntBASIC2.45□□□□□ -2.02
RFX7Q2KHR2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX7Q2KHR2 AC022336.2-201ENST00000568966 2538 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 MIR1250-201ENST00000408098 113 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 VTA1P1-201ENST00000414044 866 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 RPS7P2-201ENST00000435134 607 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AC135721.1-201ENST00000497954 479 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 GTF2IP9-201ENST00000502460 301 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 RNU6-319P-201ENST00000516025 108 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AC022690.1-201ENST00000526681 550 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AP001004.1-201ENST00000582468 324 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 AC008687.2-201ENST00000597865 520 ntBASIC2.44□□□□□ -2.02
RFX7Q2KHR2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
RFX7Q2KHR2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 RNA5SP213-201ENST00000391031 106 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 RNA5SP338-201ENST00000410495 85 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 AC096632.1-201ENST00000427395 310 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 RPL23AP70-201ENST00000483361 460 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 MTND3P6-201ENST00000485242 339 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 RNU6-295P-201ENST00000516901 104 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 AP003717.3-201ENST00000544832 1180 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 OR4K7P-201ENST00000580232 945 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 RPL23AP61-201ENST00000623642 466 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX7Q2KHR2 MIR203B-201ENST00000636080 86 ntBASIC2.43□□□□□ -2.02
RFX7Q2KHR2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL161781.1-201ENST00000354277 403 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 RNA5SP160-201ENST00000364866 120 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 MTND1P23-201ENST00000416931 372 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 MTCYBP24-201ENST00000420387 1106 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC007677.1-201ENST00000445757 515 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL590664.1-201ENST00000448065 339 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 RN7SKP31-201ENST00000516354 278 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 ERHP1-201ENST00000523006 310 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC068339.2-201ENST00000534395 618 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 TRAV11-201ENST00000539512 339 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 ACTR3BP3-201ENST00000565577 979 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 MTND4LP24-201ENST00000572277 291 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL022099.1-201ENST00000604551 712 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC012213.4-201ENST00000606457 354 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC055764.2-201ENST00000610089 670 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 MIR7973-1-201ENST00000614683 76 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AC006963.1-201ENST00000624003 1052 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
RFX7Q2KHR2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RFX7Q2KHR2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX7Q2KHR2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX7Q2KHR2 AC093536.2-201ENST00000565257 1406 ntBASIC2.41□□□□□ -2.02
RFX7Q2KHR2 AC080128.1-201ENST00000474389 1917 ntBASIC2.41□□□□□ -2.02
RFX7Q2KHR2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
RFX7Q2KHR2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX7Q2KHR2 MIR627-201ENST00000384979 97 ntBASIC2.41□□□□□ -2.02
RFX7Q2KHR2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms