Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AP002884.2-201ENST00000471647 395 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 BZW1P2-201ENST00000473537 826 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 BET1P1-201ENST00000482276 359 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AP001086.1-201ENST00000494882 321 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC090453.1-201ENST00000495560 436 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 RPF2P2-201ENST00000504693 896 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 LTV1P1-201ENST00000510683 1237 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 RNU6-678P-201ENST00000516832 109 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC239860.2-201ENST00000525886 270 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 AL109653.1-201ENST00000603091 248 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC080013.4-201ENST00000607624 649 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC097065.2-201ENST00000608159 533 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC073968.1-201ENST00000618594 637 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX1Q15475 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX1Q15475 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX1Q15475 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIX1Q15475 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SIX1Q15475 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SIX1Q15475 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SIX1Q15475 RNU6-525P-201ENST00000363685 104 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 RNU6-553P-201ENST00000364047 96 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 RNVU1-3-201ENST00000364313 161 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 MTND4LP20-201ENST00000402379 270 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 FNDC3CP-201ENST00000420795 1155 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 CKS1BP5-201ENST00000434172 273 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX1Q15475 Z83846.1-201ENST00000446798 265 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 EEF1E1P1-201ENST00000446998 430 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX1Q15475 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX1Q15475 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX1Q15475 RPL7P23-201ENST00000493874 747 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX1Q15475 AC093534.1-201ENST00000504977 132 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC026427.2-201ENST00000506228 536 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC111000.2-201ENST00000507775 550 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX1Q15475 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.15□□□□□ -1.91
SIX1Q15475 AC010486.3-201ENST00000511602 785 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.15□□□□□ -1.91
SIX1Q15475 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.15□□□□□ -1.91
SIX1Q15475 RNA5SP216-201ENST00000516111 123 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 RNU6-150P-201ENST00000516237 95 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 RNU6-759P-201ENST00000516740 103 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 MTCO1P47-201ENST00000523889 1271 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC087373.1-201ENST00000524920 491 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX1Q15475 AC055876.1-202ENST00000567053 138 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 MIR5195-201ENST00000583555 115 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX1Q15475 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX1Q15475 AL031985.2-201ENST00000600955 480 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AL031667.3-201ENST00000620124 655 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC006065.5-201ENST00000623427 349 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 NUP58P1-201ENST00000502546 1738 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX1Q15475 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 AC011477.1-204ENST00000623416 1325 ntBASIC3.15□□□□□ -1.91
SIX1Q15475 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SIX1Q15475 AL353743.1-202ENST00000431724 1695 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIX1Q15475 RPL21P132-201ENST00000331267 462 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SIX1Q15475 Y_RNA.18-201ENST00000362461 102 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 RNU6-462P-201ENST00000362659 105 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 RNU6-328P-201ENST00000390887 106 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 AL355379.1-201ENST00000405542 640 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 TPMTP2-201ENST00000414372 726 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 AC009518.2-201ENST00000418056 731 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 MTCYBP24-201ENST00000420387 1106 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 RPL7P30-201ENST00000420888 709 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 AC092832.1-201ENST00000422934 400 ntBASIC3.14□□□□□ -1.91
SIX1Q15475 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.14□□□□□ -1.91
SIX1Q15475 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.14□□□□□ -1.91
SIX1Q15475 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms