Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RPS20P20-201ENST00000460498 340 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 VN1R105P-201ENST00000486595 910 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC068724.1-201ENST00000487100 792 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC114967.1-201ENST00000504890 259 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.22□□□□□ -1.89
SCN1BQ07699 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AP000926.4-201ENST00000527351 454 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AP002748.2-201ENST00000528671 348 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN1BQ07699 YPEL5P3-201ENST00000547227 352 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN1BQ07699 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN1BQ07699 TRAV37-201ENST00000553906 342 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN1BQ07699 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN1BQ07699 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.22□□□□□ -1.89
SCN1BQ07699 VN1R90P-201ENST00000595717 726 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 NUTF2P8-201ENST00000604593 363 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC091965.4-201ENST00000607691 587 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC004696.1-201ENST00000614345 607 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC013476.2-201ENST00000614456 459 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC079395.3-201ENST00000615161 484 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC010133.1-201ENST00000615809 842 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AL031667.3-201ENST00000620124 655 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN1BQ07699 MIR492-201ENST00000638676 116 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCN1BQ07699 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN1BQ07699 AC007785.2-201ENST00000598627 1916 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 FAM35BP-202ENST00000497389 3337 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCN1BQ07699 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SCN1BQ07699 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SCN1BQ07699 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.89
SCN1BQ07699 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN1BQ07699 RNU6-270P-201ENST00000364131 105 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNA5SP42-201ENST00000364278 115 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 SNORA62-201ENST00000365493 153 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 MIR141-201ENST00000384975 95 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 ATP5F1P3-201ENST00000397213 657 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC119751.3-201ENST00000399720 670 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AL109755.1-201ENST00000401791 649 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNA5SP317-201ENST00000410176 116 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNU6-628P-201ENST00000410675 107 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNA5SP311-201ENST00000411290 116 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC098592.1-201ENST00000419352 333 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RPL23AP82-202ENST00000427528 469 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN1BQ07699 CBWD4P-201ENST00000445695 655 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC104978.1-201ENST00000449387 391 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN1BQ07699 AP1S2P1-201ENST00000457344 379 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNU6-420P-201ENST00000458780 107 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 snoU13.28-201ENST00000459235 104 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC091564.1-201ENST00000464563 479 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN1BQ07699 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN1BQ07699 RN7SKP122-201ENST00000515923 296 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNA5SP315-201ENST00000516340 116 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 RNA5SP312-201ENST00000517068 116 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 NRON-201ENST00000517270 370 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 NDUFA5P2-201ENST00000519723 344 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.21□□□□□ -1.9
SCN1BQ07699 MTATP6P15-201ENST00000527233 835 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 HIGD1AP1-201ENST00000550979 275 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AL133153.1-201ENST00000557756 303 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.21□□□□□ -1.9
SCN1BQ07699 AP000811.1-201ENST00000603803 651 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC018714.1-201ENST00000605028 208 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AL136295.6-201ENST00000610486 658 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC093838.1-201ENST00000613014 469 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 SDR42E1P2-201ENST00000614861 481 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 AP000676.3-201ENST00000623299 569 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC110801.1-201ENST00000623590 212 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AC073308.1-201ENST00000623696 305 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 AP003122.6-201ENST00000623831 495 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SCN1BQ07699 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SCN1BQ07699 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SCN1BQ07699 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms