Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 CR383656.7-201ENST00000548164 174 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AL512310.1-201ENST00000548639 172 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC025678.1-201ENST00000567861 338 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 CYP4A43P-201ENST00000568156 121 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 MIR5685-201ENST00000579080 79 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 BNIP3P33-201ENST00000598912 569 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AL031176.1-201ENST00000604554 466 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC010680.4-201ENST00000605334 543 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC004908.2-201ENST00000609090 574 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 NMD3P1-201ENST00000439704 1488 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 Y_RNA.159-201ENST00000363674 87 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 RNU6-169P-201ENST00000365336 107 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 MRPS18BP2-201ENST00000434310 759 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 RPS17P13-201ENST00000448974 407 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 RPL21P11-201ENST00000461458 483 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 FCF1P3-201ENST00000496394 590 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AL133271.1-201ENST00000538229 291 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 OR4T1P-201ENST00000554933 911 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 HSPE1P5-201ENST00000561489 272 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC034105.4-201ENST00000568304 277 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 RN7SL703P-201ENST00000578485 302 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC245517.5-201ENST00000611529 162 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AL354798.1-201ENST00000622505 329 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AL356585.4-201ENST00000623078 1229 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AL138713.1-201ENST00000624026 2130 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC055839.1-201ENST00000634467 498 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 MIR6715B-201ENST00000637172 77 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDC42EP1Q00587 MTCO1P9-201ENST00000505577 1534 ntBASIC4.41□□□□□ -1.7
CDC42EP1Q00587 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP1Q00587 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP1Q00587 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP1Q00587 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP1Q00587 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDC42EP1Q00587 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 OR1S2-201ENST00000302592 978 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 RNA5SP97-201ENST00000365006 84 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 RNU6-483P-201ENST00000384088 108 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 SNORA3.3-201ENST00000408712 125 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 SNORA3C-201ENST00000408792 125 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 RN7SKP285-201ENST00000410137 318 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 RNU2-62P-201ENST00000410868 191 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 MTATP6P18-201ENST00000417994 673 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 HMGB3P20-201ENST00000417997 600 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AL353193.1-201ENST00000421444 268 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 OR4K11P-201ENST00000431829 904 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 GPR143P-201ENST00000434155 205 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 HMGB1P31-201ENST00000437242 427 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 VN1R34P-201ENST00000447387 883 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 RPL21P129-201ENST00000491732 478 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC020593.1-201ENST00000507399 299 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.4□□□□□ -1.71
CDC42EP1Q00587 OR4R3P-201ENST00000525084 838 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms